Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6J40_RS16090 | Genome accession | NZ_CP020412 |
| Coordinates | 3652208..3652627 (-) | Length | 139 a.a. |
| NCBI ID | WP_003635608.1 | Uniprot ID | D3HKN8 |
| Organism | Legionella longbeachae strain FDAARGOS_201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3647208..3657627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J40_RS16065 (A6J40_16030) | potA | 3647347..3648441 (+) | 1095 | WP_003635598.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| A6J40_RS16070 (A6J40_16035) | - | 3648431..3649255 (+) | 825 | WP_003635599.1 | ABC transporter permease | - |
| A6J40_RS16075 (A6J40_16040) | - | 3649252..3650019 (+) | 768 | WP_003635601.1 | ABC transporter permease subunit | - |
| A6J40_RS16080 (A6J40_16045) | - | 3650016..3651041 (+) | 1026 | WP_003635604.1 | PotD/PotF family extracellular solute-binding protein | - |
| A6J40_RS16085 (A6J40_16050) | - | 3651283..3651921 (+) | 639 | WP_003635606.1 | hypothetical protein | - |
| A6J40_RS16090 (A6J40_16055) | pilE | 3652208..3652627 (-) | 420 | WP_003635608.1 | type IV pilin protein | Machinery gene |
| A6J40_RS16095 (A6J40_16060) | - | 3652640..3656119 (-) | 3480 | WP_003635609.1 | pilus assembly protein | - |
| A6J40_RS16100 (A6J40_18320) | - | 3656132..3656701 (-) | 570 | WP_012979330.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15313.53 Da Isoelectric Point: 7.5805
>NTDB_id=222455 A6J40_RS16090 WP_003635608.1 3652208..3652627(-) (pilE) [Legionella longbeachae strain FDAARGOS_201]
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
Nucleotide
Download Length: 420 bp
>NTDB_id=222455 A6J40_RS16090 WP_003635608.1 3652208..3652627(-) (pilE) [Legionella longbeachae strain FDAARGOS_201]
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Legionella pneumophila str. Paris |
59.574 |
100 |
0.604 |
| pilE | Legionella pneumophila strain ERS1305867 |
59.574 |
100 |
0.604 |