Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | A6J40_RS09580 | Genome accession | NZ_CP020412 |
| Coordinates | 2164643..2165695 (-) | Length | 350 a.a. |
| NCBI ID | WP_003633239.1 | Uniprot ID | D3HP88 |
| Organism | Legionella longbeachae strain FDAARGOS_201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2159643..2170695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J40_RS09555 (A6J40_09520) | - | 2160195..2160911 (-) | 717 | WP_003633231.1 | dienelactone hydrolase family protein | - |
| A6J40_RS09560 (A6J40_09525) | - | 2161165..2162043 (+) | 879 | WP_003633233.1 | alpha/beta hydrolase | - |
| A6J40_RS09565 (A6J40_09530) | rpoH | 2162182..2163036 (-) | 855 | WP_003633234.1 | RNA polymerase sigma factor RpoH | - |
| A6J40_RS09570 (A6J40_09535) | ftsX | 2163083..2164012 (-) | 930 | WP_003633236.1 | permease-like cell division protein FtsX | - |
| A6J40_RS09575 (A6J40_09540) | ftsE | 2164006..2164656 (-) | 651 | WP_003633237.1 | cell division ATP-binding protein FtsE | - |
| A6J40_RS09580 (A6J40_09545) | pilA | 2164643..2165695 (-) | 1053 | WP_003633239.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| A6J40_RS09585 (A6J40_09550) | - | 2165784..2167079 (+) | 1296 | WP_396426634.1 | M16 family metallopeptidase | - |
| A6J40_RS09590 (A6J40_09555) | - | 2167076..2168380 (+) | 1305 | WP_003633242.1 | pitrilysin family protein | - |
| A6J40_RS09595 (A6J40_09560) | rsmD | 2168377..2168922 (+) | 546 | WP_003633243.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| A6J40_RS09600 (A6J40_09565) | dotD | 2169091..2169582 (+) | 492 | WP_003633244.1 | type IVB secretion system lipoprotein DotD | - |
| A6J40_RS09605 (A6J40_09570) | - | 2169563..2170489 (+) | 927 | WP_003633245.1 | type IV secretion system DotC family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38240.87 Da Isoelectric Point: 6.5102
>NTDB_id=222446 A6J40_RS09580 WP_003633239.1 2164643..2165695(-) (pilA) [Legionella longbeachae strain FDAARGOS_201]
MIKWFKRSHTPTSSEADESQHKEELMPQAPMTKAEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETLLISADLGIETTQAVLNQLTEGLARKQLSDGNAVYEALKSYLQGILKQKNQSLTLETADHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKMDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLSPDAPHETMLILDASIGQNALVQARQFNEAIGLTGVTMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
MIKWFKRSHTPTSSEADESQHKEELMPQAPMTKAEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETLLISADLGIETTQAVLNQLTEGLARKQLSDGNAVYEALKSYLQGILKQKNQSLTLETADHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKMDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLSPDAPHETMLILDASIGQNALVQARQFNEAIGLTGVTMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
Nucleotide
Download Length: 1053 bp
>NTDB_id=222446 A6J40_RS09580 WP_003633239.1 2164643..2165695(-) (pilA) [Legionella longbeachae strain FDAARGOS_201]
ATGATTAAATGGTTCAAACGCAGTCACACGCCAACTTCTTCAGAAGCAGATGAGTCCCAGCATAAAGAAGAGTTAATGCC
GCAAGCTCCTATGACGAAGGCGGAACAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCGCGTTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGGAAAAAAGAAATCAGTCAAGAGTTGCTGGAT
GAGTTAGAAACTCTTTTAATCAGTGCTGATTTAGGGATAGAAACCACACAAGCGGTATTAAATCAATTGACAGAAGGTTT
AGCACGTAAGCAATTGTCTGACGGTAATGCTGTTTATGAGGCACTTAAATCGTATTTACAAGGGATTTTAAAGCAAAAAA
ATCAATCGTTGACTTTAGAAACCGCAGATCATTCCCCTTTTGTCATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACCACTATTGGTAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCTGGAGATACTTTTAGAGC
TGCAGCGGTAGAACAGTTGCTTGTTTGGGGGGAGCGAAATGATATTCCCGTTATTGCCCAACATACAGGAGCTGATAGTG
CATCCGTTATTTTTGATGCTCTTCAGGCAGCTAAAGCACGAAAAATGGATGTATTAATTGCGGATACGGCGGGACGCTTA
CATACCCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTATCTCCTGATGCGCCTCATGA
AACAATGTTGATATTGGATGCATCTATAGGGCAAAATGCATTAGTTCAAGCAAGGCAATTCAATGAAGCGATTGGATTAA
CGGGTGTTACCATGACTAAACTGGATGGGACAGCTAAAGGCGGTATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAGGATCTTCAACCCTTTGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
ATGATTAAATGGTTCAAACGCAGTCACACGCCAACTTCTTCAGAAGCAGATGAGTCCCAGCATAAAGAAGAGTTAATGCC
GCAAGCTCCTATGACGAAGGCGGAACAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCGCGTTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGGAAAAAAGAAATCAGTCAAGAGTTGCTGGAT
GAGTTAGAAACTCTTTTAATCAGTGCTGATTTAGGGATAGAAACCACACAAGCGGTATTAAATCAATTGACAGAAGGTTT
AGCACGTAAGCAATTGTCTGACGGTAATGCTGTTTATGAGGCACTTAAATCGTATTTACAAGGGATTTTAAAGCAAAAAA
ATCAATCGTTGACTTTAGAAACCGCAGATCATTCCCCTTTTGTCATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACCACTATTGGTAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCTGGAGATACTTTTAGAGC
TGCAGCGGTAGAACAGTTGCTTGTTTGGGGGGAGCGAAATGATATTCCCGTTATTGCCCAACATACAGGAGCTGATAGTG
CATCCGTTATTTTTGATGCTCTTCAGGCAGCTAAAGCACGAAAAATGGATGTATTAATTGCGGATACGGCGGGACGCTTA
CATACCCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTATCTCCTGATGCGCCTCATGA
AACAATGTTGATATTGGATGCATCTATAGGGCAAAATGCATTAGTTCAAGCAAGGCAATTCAATGAAGCGATTGGATTAA
CGGGTGTTACCATGACTAAACTGGATGGGACAGCTAAAGGCGGTATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAGGATCTTCAACCCTTTGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
55.375 |
87.714 |
0.486 |