Detailed information NTG0222417

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H96_RS19545
• Genome accession: NZ_CP026035
• Coordinates: 3809929..3811056 (-)
• Length: 375 a.a.
• NCBI ID: WP_249848112.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_68
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3804929..3816056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H96_RS19510 (C2H96_19450)	-	3805285..3805830 (+)	546	WP_087961310.1	SMI1/KNR4 family protein	-
C2H96_RS19515 (C2H96_19455)	-	3806023..3806463 (-)	441	Protein_3783	SMI1/KNR4 family protein	-
C2H96_RS19520 (C2H96_19460)	-	3806473..3806865 (-)	393	WP_087961312.1	immunity 50 family protein	-
C2H96_RS19525 (C2H96_19465)	yqcF	3806978..3807556 (-)	579	WP_249848107.1	type VII secretion system immunity protein YqcF	-
C2H96_RS19530 (C2H96_19470)	yqcG	3807571..3809166 (-)	1596	WP_249848109.1	LXG family T7SS effector endonuclease toxin YqcG	-
C2H96_RS19535 (C2H96_19475)	-	3809536..3809695 (-)	160	Protein_3787	hypothetical protein	-
C2H96_RS19540 (C2H96_19480)	phrE	3809805..3809939 (-)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
C2H96_RS19545 (C2H96_19485)	rapC	3809929..3811056 (-)	1128	WP_249848112.1	response regulator aspartate phosphatase RapE	Regulator
C2H96_RS19550 (C2H96_19490)	-	3811377..3811886 (+)	510	WP_249848114.1	HAD family hydrolase	-
C2H96_RS19555 (C2H96_19495)	-	3811898..3813079 (+)	1182	WP_249848116.1	hypothetical protein	-
C2H96_RS19560 (C2H96_19500)	-	3813123..3814274 (+)	1152	WP_249848118.1	DNA-processing protein DprA	-
C2H96_RS19565	-	3814363..3814697 (+)	335	Protein_3793	aspartate phosphatase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44587.41 Da
• Isoelectric Point: 7.5503

>NTDB_id=222417 C2H96_RS19545 WP_249848112.1 3809929..3811056(-) (rapC) [Bacillus subtilis strain PK5_68]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNCFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVHYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222417 C2H96_RS19545 WP_249848112.1 3809929..3811056(-) (rapC) [Bacillus subtilis strain PK5_68]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAGATCATGTTGGAATACACACTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTG
AAGAAAATCGAAGGACATAAGAAGAAGCTGGACAATATGCGAGCGTATTATTATAACTGCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAGATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
TGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCATTACAGAAAAATTAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGCGCCGTAGACTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (184-250)

• Tetratricopeptide repeat (TPR_8) (259-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.633	100	0.411
rapF	Bacillus subtilis subsp. subtilis str. 168	37.931	100	0.381