Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   A6J38_RS06800 Genome accession   NZ_CP020411
Coordinates   1386106..1386402 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain FDAARGOS_199     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1381106..1391402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J38_RS06780 (A6J38_06775) - 1382017..1382181 (-) 165 WP_005694626.1 hypothetical protein -
  A6J38_RS09325 - 1382489..1382671 (+) 183 WP_226928974.1 PT domain-containing protein -
  A6J38_RS09330 - 1382617..1383006 (+) 390 Protein_1305 TonB-dependent receptor plug domain-containing protein -
  A6J38_RS06790 (A6J38_06780) - 1383214..1385484 (+) 2271 WP_226928975.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  A6J38_RS06795 (A6J38_06785) - 1385754..1386113 (+) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  A6J38_RS06800 (A6J38_06790) HI0659 1386106..1386402 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  A6J38_RS06805 (A6J38_06795) - 1386563..1388479 (+) 1917 WP_005694483.1 ABC transporter ATP-binding protein -
  A6J38_RS06810 (A6J38_06800) - 1388489..1389025 (+) 537 WP_005694485.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  A6J38_RS06815 (A6J38_06805) - 1389041..1389592 (+) 552 WP_005694486.1 Sua5/YciO/YrdC/YwlC family protein -
  A6J38_RS06820 (A6J38_06810) aroE 1389596..1390414 (+) 819 WP_005694487.1 shikimate dehydrogenase -
  A6J38_RS06825 (A6J38_06815) - 1390411..1390968 (+) 558 WP_005694489.1 DNA-3-methyladenine glycosylase I -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=222399 A6J38_RS06800 WP_005650837.1 1386106..1386402(+) (HI0659) [Haemophilus influenzae strain FDAARGOS_199]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=222399 A6J38_RS06800 WP_005650837.1 1386106..1386402(+) (HI0659) [Haemophilus influenzae strain FDAARGOS_199]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment