Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   C2H96_RS11470 Genome accession   NZ_CP026035
Coordinates   2256739..2257587 (+) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain PK5_68     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2251739..2262587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS11450 (C2H96_11385) rsmG 2253554..2254273 (+) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  C2H96_RS11455 (C2H96_11390) noc 2254395..2255246 (+) 852 WP_003226829.1 nucleoid occlusion protein -
  C2H96_RS11460 (C2H96_11395) yyaB 2255297..2255737 (-) 441 WP_076457319.1 PH domain-containing protein -
  C2H96_RS11465 (C2H96_11400) soj 2255985..2256746 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  C2H96_RS11470 (C2H96_11405) spo0J 2256739..2257587 (+) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  C2H96_RS11475 (C2H96_11410) yyaC 2257626..2258243 (-) 618 WP_003226834.1 spore protease YyaC -
  C2H96_RS11480 (C2H96_11415) - 2258706..2259722 (+) 1017 WP_120027687.1 hypothetical protein -
  C2H96_RS11485 (C2H96_11420) yyzM 2259816..2260022 (+) 207 WP_003226838.1 DUF951 family protein -
  C2H96_RS11490 (C2H96_11425) yyaE 2260073..2262076 (+) 2004 WP_032724957.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=222370 C2H96_RS11470 WP_003226832.1 2256739..2257587(+) (spo0J) [Bacillus subtilis strain PK5_68]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=222370 C2H96_RS11470 WP_003226832.1 2256739..2257587(+) (spo0J) [Bacillus subtilis strain PK5_68]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGTTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATCTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGCTGAAACACT
TAGATCTCACGCAAGAGCAGCTTGCCAAACGTCTTGGAAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387