Detailed information NTG0222359

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2H96_RS09740
• Genome accession: NZ_CP026035
• Coordinates: 1944917..1946038 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_68
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1939917..1951038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H96_RS09720 (C2H96_09640)	znuC	1940427..1941122 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
C2H96_RS09725 (C2H96_09645)	znuA	1941177..1942136 (-)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C2H96_RS09730 (C2H96_09650)	ycdG	1942324..1944009 (-)	1686	WP_120027752.1	alpha-glucosidase	-
C2H96_RS09735 (C2H96_09655)	ycdF	1944034..1944810 (-)	777	WP_032724857.1	SDR family oxidoreductase	-
C2H96_RS09740 (C2H96_09660)	rapF	1944917..1946038 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C2H96_RS09745 (C2H96_09665)	cwlK	1946161..1946664 (+)	504	WP_032724854.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C2H96_RS09750 (C2H96_09670)	ycdC	1946672..1948033 (-)	1362	WP_032724933.1	YcdB/YcdC domain-containing protein	-
C2H96_RS09755 (C2H96_09680)	ycdB	1948220..1949641 (-)	1422	WP_032724851.1	YcdB/YcdC domain-containing protein	-
C2H96_RS09760	-	1949815..1949946 (+)	132	WP_003246334.1	hypothetical protein	-
C2H96_RS09765 (C2H96_09685)	ycdA	1949969..1951033 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=222359 C2H96_RS09740 WP_015715201.1 1944917..1946038(-) (rapF) [Bacillus subtilis strain PK5_68]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=222359 C2H96_RS09740 WP_015715201.1 1944917..1946038(-) (rapF) [Bacillus subtilis strain PK5_68]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAACAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATTAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405