Detailed information NTG0222351

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: A6J62_RS18045
• Genome accession: NZ_CP020408
• Coordinates: 2664614..2665621 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain FDAARGOS_223
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2659614..2670621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J62_RS18025 (A6J62_17880)	metJ	2659618..2659935 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
A6J62_RS18030 (A6J62_17885)	-	2660046..2661323 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
A6J62_RS18035 (A6J62_17890)	rpmE	2661631..2661849 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
A6J62_RS18040 (A6J62_17895)	priA	2662104..2664308 (+)	2205	WP_001247858.1	primosomal protein N'	-
A6J62_RS18045 (A6J62_17900)	cytR	2664614..2665621 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
A6J62_RS18050 (A6J62_17905)	-	2665793..2666344 (+)	552	WP_001884022.1	SPOR domain-containing protein	-
A6J62_RS18055 (A6J62_17910)	hslV	2666481..2667038 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
A6J62_RS18060 (A6J62_17915)	hslU	2667104..2668435 (+)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
A6J62_RS18065 (A6J62_17920)	-	2668539..2669456 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
A6J62_RS18070 (A6J62_17925)	rraA	2669531..2670046 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=222351 A6J62_RS18045 WP_000224452.1 2664614..2665621(+) (cytR) [Vibrio cholerae strain FDAARGOS_223]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=222351 A6J62_RS18045 WP_000224452.1 2664614..2665621(+) (cytR) [Vibrio cholerae strain FDAARGOS_223]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904