Detailed information NTG0222342

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H96_RS07495
• Genome accession: NZ_CP026035
• Coordinates: 1490973..1492100 (+)
• Length: 375 a.a.
• NCBI ID: WP_249848351.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_68
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1485973..1497100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H96_RS07465 (C2H96_07400)	-	1486457..1486795 (-)	339	WP_075749485.1	hypothetical protein	-
C2H96_RS07470 (C2H96_07405)	yeeF	1486962..1488968 (+)	2007	WP_249848347.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
C2H96_RS07475 (C2H96_07410)	-	1488973..1489443 (+)	471	WP_077671613.1	antitoxin YezG family protein	-
C2H96_RS07480 (C2H96_07415)	-	1489521..1489991 (+)	471	WP_045926655.1	antitoxin YezG family protein	-
C2H96_RS07485 (C2H96_07420)	-	1490220..1490426 (+)	207	WP_249848434.1	hypothetical protein	-
C2H96_RS07490 (C2H96_07425)	-	1490493..1490783 (+)	291	WP_249848349.1	hypothetical protein	-
C2H96_RS07495 (C2H96_07430)	rapC	1490973..1492100 (+)	1128	WP_249848351.1	Rap family tetratricopeptide repeat protein	Regulator
C2H96_RS07500 (C2H96_07435)	-	1492090..1492287 (+)	198	WP_014479085.1	hypothetical protein	-
C2H96_RS07505 (C2H96_07440)	-	1492716..1495733 (-)	3018	WP_249848353.1	SIR2 family protein	-
C2H96_RS07510 (C2H96_07445)	-	1495967..1496176 (+)	210	WP_014479083.1	hypothetical protein	-
C2H96_RS07515	-	1496702..1497022 (+)	321	WP_128993639.1	recombinase family protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44327.05 Da
• Isoelectric Point: 6.9585

>NTDB_id=222342 C2H96_RS07495 WP_249848351.1 1490973..1492100(+) (rapC) [Bacillus subtilis strain PK5_68]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDVMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFGDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222342 C2H96_RS07495 WP_249848351.1 1490973..1492100(+) (rapC) [Bacillus subtilis strain PK5_68]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAGCGGGACATTGACGTCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAATACAATTCCTTATATTTCAGATGAAATCG
AGCGGGCAGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGATCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGTAACTA
CGACGATTTAGAAAGTCATGAAAAGGCACTCCCTCACCTCGAGCAGGCGCTAAAAGGCGCACGACTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTACCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATACTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAAGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGGCGATA
ACCTATTTAAAATCATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCATCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	39.314	100	0.397