Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C2H94_RS20150 Genome accession   NZ_CP026034
Coordinates   3881862..3882479 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain PK5_52     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3876862..3887479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS20120 (C2H94_20020) yndJ 3877188..3878828 (+) 1641 WP_103804152.1 YndJ family protein -
  C2H94_RS20125 (C2H94_20025) - 3878906..3879220 (+) 315 WP_103804150.1 hypothetical protein -
  C2H94_RS20130 (C2H94_20030) pghL 3879445..3880203 (+) 759 WP_103804148.1 gamma-polyglutamate hydrolase PghL -
  C2H94_RS20135 (C2H94_20035) - 3880230..3880679 (-) 450 WP_003245454.1 YndM family protein -
  C2H94_RS20140 (C2H94_20040) fosB 3880888..3881322 (+) 435 WP_103804146.1 metallothiol transferase FosB -
  C2H94_RS20145 - 3881231..3881508 (+) 278 Protein_3912 hypothetical protein -
  C2H94_RS20150 (C2H94_20050) dinR/lexA 3881862..3882479 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C2H94_RS20155 (C2H94_20055) yneA 3882629..3882946 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  C2H94_RS20160 (C2H94_20060) dinL 3882965..3883618 (+) 654 WP_003231596.1 recombinase family protein -
  C2H94_RS20165 (C2H94_20065) ynzC 3883682..3883915 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  C2H94_RS20170 (C2H94_20070) recP/tkt 3884084..3886087 (+) 2004 WP_003231593.1 transketolase Machinery gene
  C2H94_RS20175 (C2H94_20075) sirA 3886240..3886686 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C2H94_RS20180 (C2H94_20080) yneF 3886772..3886990 (+) 219 WP_003221221.1 YneF family protein -
  C2H94_RS20185 (C2H94_20085) ynzD 3887064..3887237 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=222283 C2H94_RS20150 WP_003238209.1 3881862..3882479(-) (dinR/lexA) [Bacillus subtilis strain PK5_52]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=222283 C2H94_RS20150 WP_003238209.1 3881862..3882479(-) (dinR/lexA) [Bacillus subtilis strain PK5_52]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTCGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1