Detailed information NTG0222231

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H94_RS14030
• Genome accession: NZ_CP026034
• Coordinates: 2670196..2671323 (-)
• Length: 375 a.a.
• NCBI ID: WP_072175461.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_52
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2665196..2676323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H94_RS14015 (C2H94_13950)	-	2666886..2668403 (+)	1518	WP_249849624.1	hypothetical protein	-
C2H94_RS14020 (C2H94_13955)	-	2668396..2669334 (+)	939	WP_072175459.1	hypothetical protein	-
C2H94_RS14025 (C2H94_13960)	-	2670009..2670206 (-)	198	WP_072175460.1	hypothetical protein	-
C2H94_RS14030 (C2H94_13965)	rapC	2670196..2671323 (-)	1128	WP_072175461.1	tetratricopeptide repeat protein	Regulator
C2H94_RS14035 (C2H94_13970)	-	2671514..2671817 (-)	304	Protein_2708	hypothetical protein	-
C2H94_RS21110	-	2671902..2672084 (-)	183	WP_349643237.1	hypothetical protein	-
C2H94_RS21115	-	2672084..2672296 (-)	213	WP_283945568.1	immunity 22 family protein	-
C2H94_RS14045 (C2H94_13980)	-	2672309..2674195 (-)	1887	WP_125121420.1	T7SS effector LXG polymorphic toxin	-
C2H94_RS14050 (C2H94_13985)	-	2674362..2674700 (+)	339	WP_021481280.1	hypothetical protein	-
C2H94_RS14055 (C2H94_13990)	-	2674713..2675633 (+)	921	WP_085187015.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44409.13 Da
• Isoelectric Point: 6.8169

>NTDB_id=222231 C2H94_RS14030 WP_072175461.1 2670196..2671323(-) (rapC) [Bacillus subtilis strain PK5_52]
MGTISSPHVGIKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKVLPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222231 C2H94_RS14030 WP_072175461.1 2670196..2671323(-) (rapC) [Bacillus subtilis strain PK5_52]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATAAAAATTAATGAATGGAACCGGCATATTCAAAAGTTTAATGTGACAGA
TGCTGAAATGCTTAAAGCTGAGATCGAACGAGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAACTCGTTGAATACTACTATTACTTTTTTCAAGGGATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACCATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACACACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGACGATTTAGAAAGTCATGAAAAGGTGCTCCCTCACCTTGAACAGGCACTAAAAGGCGCACGGCTTCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATTCTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACGATA
ATCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392