Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C2H94_RS10550 Genome accession   NZ_CP026034
Coordinates   1992669..1993496 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain PK5_52     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1987669..1998496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS10525 (C2H94_10475) yaaO 1988732..1990174 (+) 1443 WP_038827633.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  C2H94_RS10530 (C2H94_10480) tmk 1990171..1990809 (+) 639 WP_015253015.1 dTMP kinase -
  C2H94_RS10535 (C2H94_10485) darA 1990883..1991212 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C2H94_RS10540 (C2H94_10490) yaaR 1991225..1991665 (+) 441 WP_072175223.1 YaaR family protein -
  C2H94_RS10545 (C2H94_10495) holB 1991677..1992666 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  C2H94_RS10550 (C2H94_10500) yaaT 1992669..1993496 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  C2H94_RS10555 (C2H94_10505) yabA 1993511..1993870 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  C2H94_RS10560 (C2H94_10510) trmNF 1993929..1994672 (+) 744 WP_021479732.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C2H94_RS10565 (C2H94_10515) yazA 1994659..1994958 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  C2H94_RS10570 (C2H94_10520) rsmI 1994933..1995811 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C2H94_RS10575 (C2H94_10525) abrB 1995860..1996150 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=222207 C2H94_RS10550 WP_003226767.1 1992669..1993496(+) (yaaT) [Bacillus subtilis strain PK5_52]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=222207 C2H94_RS10550 WP_003226767.1 1992669..1993496(+) (yaaT) [Bacillus subtilis strain PK5_52]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTAGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996