Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   C2H94_RS10280 Genome accession   NZ_CP026034
Coordinates   1941112..1941960 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain PK5_52     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1936112..1946960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS10260 (C2H94_10210) yyaE 1936624..1938627 (-) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -
  C2H94_RS10265 (C2H94_10215) yyzM 1938678..1938884 (-) 207 WP_003226838.1 DUF951 family protein -
  C2H94_RS10270 (C2H94_10220) - 1938977..1939993 (-) 1017 WP_010886647.1 membrane protein -
  C2H94_RS10275 (C2H94_10225) yyaC 1940456..1941073 (+) 618 WP_003243890.1 spore protease YyaC -
  C2H94_RS10280 (C2H94_10230) spo0J 1941112..1941960 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  C2H94_RS10285 (C2H94_10235) soj 1941953..1942714 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  C2H94_RS10290 (C2H94_10240) yyaB 1942962..1943402 (+) 441 WP_003244005.1 PH domain-containing protein -
  C2H94_RS10295 (C2H94_10245) noc 1943453..1944304 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  C2H94_RS10300 (C2H94_10250) rsmG 1944426..1945145 (-) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=222204 C2H94_RS10280 WP_003226832.1 1941112..1941960(-) (spo0J) [Bacillus subtilis strain PK5_52]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=222204 C2H94_RS10280 WP_003226832.1 1941112..1941960(-) (spo0J) [Bacillus subtilis strain PK5_52]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGTTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATCTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGCTGAAACACT
TAGATCTCACGCAAGAGCAGCTTGCCAAACGTCTTGGAAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387