Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C2H94_RS09995 Genome accession   NZ_CP026034
Coordinates   1894841..1895635 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain PK5_52     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1889841..1900635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS09970 (C2H94_09925) rocD 1890419..1891624 (-) 1206 WP_072175728.1 ornithine aminotransferase -
  C2H94_RS09975 (C2H94_09930) rocR 1891865..1893250 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  C2H94_RS09980 (C2H94_09935) - 1893232..1893384 (-) 153 Protein_1967 ATP-binding protein -
  C2H94_RS09985 - 1893409..1893537 (-) 129 WP_125121027.1 hypothetical protein -
  C2H94_RS09990 (C2H94_09940) htrA 1893557..1894759 (-) 1203 WP_134991656.1 serine protease HtrC Regulator
  C2H94_RS09995 (C2H94_09945) vicX 1894841..1895635 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C2H94_RS10000 (C2H94_09950) walI 1895657..1896499 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  C2H94_RS10005 (C2H94_09955) walH 1896486..1897853 (-) 1368 WP_032722849.1 WalRK two-component regulatory system regulator WalH -
  C2H94_RS10010 (C2H94_09960) walK 1897843..1899678 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  C2H94_RS10015 (C2H94_09965) walR 1899686..1900393 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=222201 C2H94_RS09995 WP_003226939.1 1894841..1895635(-) (vicX) [Bacillus subtilis strain PK5_52]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=222201 C2H94_RS09995 WP_003226939.1 1894841..1895635(-) (vicX) [Bacillus subtilis strain PK5_52]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
AGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment