Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H94_RS06970 Genome accession   NZ_CP026034
Coordinates   1292716..1293429 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_52     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287716..1298429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS06950 (C2H94_06925) yvcT 1287860..1288837 (+) 978 WP_072175101.1 D-glycerate dehydrogenase -
  C2H94_RS06955 (C2H94_06930) psdB 1288875..1290815 (-) 1941 WP_024571588.1 lantibiotic ABC transporter permease PsdB -
  C2H94_RS06960 (C2H94_06935) psdA 1290790..1291569 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C2H94_RS06965 (C2H94_06940) psdS 1291652..1292722 (-) 1071 WP_072175102.1 two-component sensor histidine kinase PsdS -
  C2H94_RS06970 (C2H94_06945) braR 1292716..1293429 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  C2H94_RS06975 (C2H94_06950) - 1293576..1293785 (+) 210 WP_038829457.1 hypothetical protein -
  C2H94_RS06980 (C2H94_06955) yvcN 1293821..1294585 (-) 765 WP_249849536.1 arylamine N-acetyltransferase -
  C2H94_RS06985 (C2H94_06960) crh 1294586..1294843 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C2H94_RS06990 (C2H94_06965) whiA 1294867..1295817 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  C2H94_RS06995 (C2H94_06970) mgfK 1295840..1296793 (-) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  C2H94_RS07000 (C2H94_06975) rapZ 1296795..1297682 (-) 888 WP_003228143.1 RNase adapter RapZ -
  C2H94_RS07005 (C2H94_06980) yvcI 1297707..1298183 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=222184 C2H94_RS06970 WP_021480675.1 1292716..1293429(-) (braR) [Bacillus subtilis strain PK5_52]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=222184 C2H94_RS06970 WP_021480675.1 1292716..1293429(-) (braR) [Bacillus subtilis strain PK5_52]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43