Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | C2H94_RS02270 | Genome accession | NZ_CP026034 |
| Coordinates | 385871..386281 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | P42983 |
| Organism | Bacillus subtilis strain PK5_52 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 380871..391281
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H94_RS02240 (C2H94_02225) | - | 380958..381098 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| C2H94_RS02245 (C2H94_02230) | yqeF | 381404..382135 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| C2H94_RS02250 (C2H94_02235) | cwlH | 382387..383139 (-) | 753 | WP_021480067.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| C2H94_RS02255 (C2H94_02240) | yqeD | 383326..383952 (+) | 627 | WP_046160610.1 | TVP38/TMEM64 family protein | - |
| C2H94_RS02260 (C2H94_02245) | gnd | 383972..384865 (-) | 894 | WP_072175805.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| C2H94_RS02265 (C2H94_02250) | yqeB | 385117..385839 (+) | 723 | WP_072175806.1 | hypothetical protein | - |
| C2H94_RS02270 (C2H94_02255) | nucA/comI | 385871..386281 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| C2H94_RS02275 (C2H94_02260) | - | 386477..386827 (+) | 351 | Protein_452 | sigma-70 family RNA polymerase sigma factor | - |
| C2H94_RS02280 (C2H94_02265) | - | 386849..387268 (-) | 420 | WP_249849480.1 | NUDIX domain-containing protein | - |
| C2H94_RS02285 (C2H94_02270) | spoIVCA | 387336..388796 (-) | 1461 | WP_249849668.1 | site-specific DNA recombinase SpoIVCA | - |
| C2H94_RS02290 (C2H94_02275) | - | 388754..388932 (-) | 179 | Protein_455 | hypothetical protein | - |
| C2H94_RS02295 (C2H94_02280) | - | 389178..390992 (-) | 1815 | WP_249849481.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=222156 C2H94_RS02270 WP_009967785.1 385871..386281(-) (nucA/comI) [Bacillus subtilis strain PK5_52]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=222156 C2H94_RS02270 WP_009967785.1 385871..386281(-) (nucA/comI) [Bacillus subtilis strain PK5_52]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAGCAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGTAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAGCAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGTAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |