Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H91_RS13520 Genome accession   NZ_CP026030
Coordinates   2727751..2728464 (+) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK3_9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2722751..2733464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS13485 (C2H91_13505) yvcI 2722997..2723473 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C2H91_RS13490 (C2H91_13510) rapZ 2723498..2724385 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C2H91_RS13495 (C2H91_13515) mgfK 2724387..2725340 (+) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  C2H91_RS13500 (C2H91_13520) whiA 2725363..2726313 (+) 951 WP_003228147.1 DNA-binding protein WhiA -
  C2H91_RS13505 (C2H91_13525) crh 2726337..2726594 (+) 258 WP_232567136.1 HPr family phosphocarrier protein -
  C2H91_RS13510 (C2H91_13530) yvcN 2726595..2727359 (+) 765 WP_232567137.1 arylamine N-acetyltransferase -
  C2H91_RS13515 (C2H91_13535) - 2727395..2727604 (-) 210 WP_021480676.1 hypothetical protein -
  C2H91_RS13520 (C2H91_13540) braR 2727751..2728464 (+) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  C2H91_RS13525 (C2H91_13545) psdS 2728458..2729528 (+) 1071 WP_249850830.1 two-component sensor histidine kinase PsdS -
  C2H91_RS13530 (C2H91_13550) psdA 2729611..2730390 (+) 780 WP_038829455.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C2H91_RS13535 (C2H91_13555) psdB 2730365..2732305 (+) 1941 WP_249850831.1 lantibiotic ABC transporter permease PsdB -
  C2H91_RS13540 (C2H91_13560) yvcT 2732342..2733319 (-) 978 WP_072173470.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=222085 C2H91_RS13520 WP_003228163.1 2727751..2728464(+) (braR) [Bacillus subtilis strain PK3_9]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=222085 C2H91_RS13520 WP_003228163.1 2727751..2728464(+) (braR) [Bacillus subtilis strain PK3_9]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCATTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment