Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H91_RS10930 Genome accession   NZ_CP026030
Coordinates   2199465..2200154 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain PK3_9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2194465..2205154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS10910 (C2H91_10920) iolG 2195619..2196653 (+) 1035 WP_232566794.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  C2H91_RS10915 (C2H91_10925) iolH 2196673..2197542 (+) 870 WP_014478480.1 sugar phosphate isomerase/epimerase -
  C2H91_RS10920 (C2H91_10930) iolI 2197628..2198464 (+) 837 WP_249850746.1 2-keto-myo-inositol isomerase -
  C2H91_RS10925 (C2H91_10935) iolJ 2198485..2199357 (+) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C2H91_RS10930 (C2H91_10940) braR 2199465..2200154 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  C2H91_RS10935 (C2H91_10945) yxdK 2200151..2201128 (+) 978 WP_024572300.1 two-component system sensor histidine kinase YxdK -
  C2H91_RS10940 (C2H91_10950) yxdL 2201272..2202045 (+) 774 WP_014115765.1 ABC transporter ATP-binding protein YxdL -
  C2H91_RS10945 (C2H91_10955) yxdM 2202020..2203888 (+) 1869 WP_249850747.1 ABC transporter permease YxdM -
  C2H91_RS10950 (C2H91_10960) yxeA 2203902..2204249 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=222070 C2H91_RS10930 WP_003243527.1 2199465..2200154(+) (braR) [Bacillus subtilis strain PK3_9]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=222070 C2H91_RS10930 WP_003243527.1 2199465..2200154(+) (braR) [Bacillus subtilis strain PK3_9]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAACGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406