Detailed information NTG0221939

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BAJT_RS17695
• Genome accession: NZ_CP020375
• Coordinates: 3582178..3583323 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JTYP2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3577178..3588323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAJT_RS17670 (BAJT_17670)	-	3578075..3578503 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
BAJT_RS17675 (BAJT_17675)	-	3578657..3579169 (+)	513	Protein_3429	bacteriocin biosynthesis protein AlbG	-
BAJT_RS17680 (BAJT_17680)	-	3579176..3580552 (-)	1377	WP_032875890.1	YncE family protein	-
BAJT_RS17685 (BAJT_17685)	-	3580592..3581947 (-)	1356	WP_032875887.1	YncE family protein	-
BAJT_RS17695 (BAJT_17695)	rapF	3582178..3583323 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
BAJT_RS19665	-	3583307..3583426 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
BAJT_RS17700 (BAJT_17700)	speB	3583549..3584421 (-)	873	WP_032875884.1	agmatinase	-
BAJT_RS17705 (BAJT_17705)	speE	3584480..3585310 (-)	831	WP_003151052.1	spermidine synthase	-
BAJT_RS17710 (BAJT_17710)	-	3585510..3587582 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
BAJT_RS17715 (BAJT_17715)	-	3587607..3588040 (-)	434	Protein_3437	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=221939 BAJT_RS17695 WP_074534220.1 3582178..3583323(+) (rapF) [Bacillus velezensis strain JTYP2]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=221939 BAJT_RS17695 WP_074534220.1 3582178..3583323(+) (rapF) [Bacillus velezensis strain JTYP2]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541