Detailed information NTG0221876

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BAJT_RS02020
• Genome accession: NZ_CP020375
• Coordinates: 397291..398439 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JTYP2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 392291..403439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAJT_RS02000 (BAJT_02000)	-	392694..393377 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
BAJT_RS02005 (BAJT_02005)	-	393392..394822 (-)	1431	WP_032872876.1	ABC transporter permease	-
BAJT_RS02010 (BAJT_02010)	-	395035..395718 (+)	684	WP_032872879.1	response regulator transcription factor	-
BAJT_RS02015 (BAJT_02015)	-	395705..397138 (+)	1434	WP_161503657.1	sensor histidine kinase	-
BAJT_RS02020 (BAJT_02020)	rapC	397291..398439 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BAJT_RS02025 (BAJT_02025)	phrC	398423..398542 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BAJT_RS02030 (BAJT_02030)	-	398693..398803 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
BAJT_RS02035 (BAJT_02035)	-	398883..400247 (-)	1365	WP_007609394.1	aspartate kinase	-
BAJT_RS02040 (BAJT_02040)	ceuB	400661..401614 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
BAJT_RS02045 (BAJT_02045)	-	401604..402551 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BAJT_RS02050 (BAJT_02050)	-	402545..403303 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=221876 BAJT_RS02020 WP_007410270.1 397291..398439(+) (rapC) [Bacillus velezensis strain JTYP2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=221876 BAJT_RS02020 WP_007410270.1 397291..398439(+) (rapC) [Bacillus velezensis strain JTYP2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568