Detailed information NTG0221791

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSK2_RS19120
• Genome accession: NZ_CP020367
• Coordinates: 3716686..3717831 (+)
• Length: 381 a.a.
• NCBI ID: WP_080529921.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GQJK2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3711686..3722831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSK2_RS19095 (BSK2_19095)	albF	3711702..3712982 (+)	1281	WP_003227558.1	pitrilysin family protein	-
BSK2_RS19100 (BSK2_19100)	albG	3712979..3713680 (+)	702	WP_080529918.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BSK2_RS19105 (BSK2_19105)	ywhL	3713686..3715062 (-)	1377	WP_080529919.1	YncE family protein	-
BSK2_RS19110 (BSK2_19110)	ywhK	3715101..3716456 (-)	1356	WP_015250986.1	YncE family protein	-
BSK2_RS21680 (BSK2_19115)	-	3716453..3716683 (-)	231	WP_080529920.1	hypothetical protein	-
BSK2_RS19120 (BSK2_19120)	rapF	3716686..3717831 (+)	1146	WP_080529921.1	tetratricopeptide repeat protein	Regulator
BSK2_RS19125 (BSK2_19125)	-	3717815..3717934 (+)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
BSK2_RS19130 (BSK2_19130)	-	3718049..3718499 (+)	451	Protein_3720	YbaK/EbsC family protein	-
BSK2_RS19135 (BSK2_19135)	speB	3718531..3719403 (-)	873	WP_003227545.1	agmatinase	-
BSK2_RS19140 (BSK2_19140)	speE	3719464..3720294 (-)	831	WP_003227543.1	spermidine synthase	-
BSK2_RS19145 (BSK2_19145)	pbpG	3720497..3722572 (+)	2076	WP_080529922.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45565.18 Da
• Isoelectric Point: 4.9877

>NTDB_id=221791 BSK2_RS19120 WP_080529921.1 3716686..3717831(+) (rapF) [Bacillus subtilis strain GQJK2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYVLAIQFFKKAESKLVFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAIAHFQKAFTLAKTEQQPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGKEYSAAAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASHYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=221791 BSK2_RS19120 WP_080529921.1 3716686..3717831(+) (rapF) [Bacillus subtilis strain GQJK2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATGTATTAGCCATTCAATTCTTTAAAAAAGCTGAGAGCAAGCTGGTTTTTG
TGAAAGATAAAATCGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATCAGAATGATTCAATGCCAGTCCTT
ATTCGGAGCCAACTTTTTGGATTTAAAACAATACGAAAAAGCAATTGCCCATTTTCAAAAAGCCTTTACACTTGCAAAAA
CAGAGCAACAGCCCCAATTAATGGGAAGAACACTTTATAACATAGCACTCTGCAAGCAAAACCAAAACAGTTTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTCCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCCTGTGAATATCATAAAAAAGGAAAAGAGTATTCTGCAG
CTGCGGGAGATACCGTGTATCTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCGGATGAGGAACGGATA
GAAAAATGTTTTGTTTTTCTTGAAAGTAAAATGATGTATGCAGATATTGAGGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAACAGGAAAATTACAAAAAAGCATCTCATTACTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (263-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (189-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.315	100	0.803
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57