Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSK2_RS07690 Genome accession   NZ_CP020367
Coordinates   1471198..1471773 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466198..1476773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS07660 (BSK2_07660) dapD 1466385..1467095 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSK2_RS07665 (BSK2_07665) dapI 1467165..1468289 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  BSK2_RS07670 (BSK2_07670) ykuS 1468351..1468596 (+) 246 WP_003232382.1 YkuS family protein -
  BSK2_RS07675 (BSK2_07675) mscT 1468633..1469436 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BSK2_RS07680 (BSK2_07680) ahpA 1469673..1470215 (+) 543 WP_080529270.1 biofilm-specific peroxidase AhpA -
  BSK2_RS07685 (BSK2_07685) ykuV 1470286..1470732 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  BSK2_RS07690 (BSK2_07690) rok 1471198..1471773 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BSK2_RS07695 (BSK2_07695) cse15 1471814..1472779 (-) 966 WP_080529271.1 spore protein Cse15 -
  BSK2_RS07700 (BSK2_07700) mobA 1472916..1473515 (+) 600 WP_041335768.1 molybdenum cofactor guanylyltransferase -
  BSK2_RS07705 (BSK2_07705) moeB 1473566..1474585 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  BSK2_RS07710 (BSK2_07710) glp 1474603..1475895 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  BSK2_RS07715 (BSK2_07715) mobB 1475856..1476377 (+) 522 WP_080529272.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=221748 BSK2_RS07690 WP_003232378.1 1471198..1471773(+) (rok) [Bacillus subtilis strain GQJK2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=221748 BSK2_RS07690 WP_003232378.1 1471198..1471773(+) (rok) [Bacillus subtilis strain GQJK2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment