Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BSK2_RS06190 Genome accession   NZ_CP020367
Coordinates   1204870..1205991 (+) Length   373 a.a.
NCBI ID   WP_250622050.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1199870..1210991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS06165 (BSK2_06165) yjbB 1200512..1201729 (+) 1218 WP_080530044.1 MFS transporter -
  BSK2_RS06170 (BSK2_06170) yjbC 1201893..1202471 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BSK2_RS06175 (BSK2_06175) spx 1202652..1203047 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  BSK2_RS06180 (BSK2_06180) yjbE 1203090..1203746 (-) 657 WP_003232944.1 TerC family protein -
  BSK2_RS21000 - 1203916..1204056 (+) 141 WP_119122854.1 hypothetical protein -
  BSK2_RS06185 (BSK2_06185) mecA 1204023..1204679 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  BSK2_RS21005 - 1204674..1204796 (-) 123 WP_021479547.1 hypothetical protein -
  BSK2_RS06190 (BSK2_06190) coiA 1204870..1205991 (+) 1122 WP_250622050.1 competence protein CoiA Machinery gene
  BSK2_RS06195 (BSK2_06195) pepF 1206221..1208050 (+) 1830 WP_175407062.1 oligoendopeptidase F -
  BSK2_RS06200 (BSK2_06200) - 1208087..1208254 (-) 168 WP_003244944.1 hypothetical protein -
  BSK2_RS06210 (BSK2_06210) spxH 1208568..1209467 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  BSK2_RS06215 (BSK2_06215) bhbI 1209464..1209862 (-) 399 WP_080529181.1 thiol management oxidoreductase -
  BSK2_RS06220 (BSK2_06220) cwlQ 1210117..1210851 (-) 735 WP_250622047.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43846.85 Da        Isoelectric Point: 10.0451

>NTDB_id=221743 BSK2_RS06190 WP_250622050.1 1204870..1205991(+) (coiA) [Bacillus subtilis strain GQJK2]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIKTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RQMFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHKKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFVE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=221743 BSK2_RS06190 WP_250622050.1 1204870..1205991(+) (coiA) [Bacillus subtilis strain GQJK2]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGATATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAAGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGACTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCTAAGGAAACAAATCGCCTT
AGGCAGATGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAAAAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACATTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTGTAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.051

100

0.971


Multiple sequence alignment