Detailed information NTG0221726

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BSK2_RS02135
• Genome accession: NZ_CP020367
• Coordinates: 421472..422620 (+)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus subtilis strain GQJK2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 416472..427620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSK2_RS02115 (BSK2_02115)	yclH	416843..417523 (-)	681	WP_080528920.1	ABC transporter ATP-binding protein	-
BSK2_RS02120 (BSK2_02120)	yclI	417539..419005 (-)	1467	WP_080528921.1	ABC transporter permease	-
BSK2_RS02125 (BSK2_02125)	yclJ	419218..419901 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
BSK2_RS02130 (BSK2_02130)	yclK	419888..421309 (+)	1422	WP_080528922.1	two-component system sensor histidine kinase YclK	-
BSK2_RS02135 (BSK2_02135)	rapC	421472..422620 (+)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
BSK2_RS02140 (BSK2_02140)	phrC	422604..422726 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
BSK2_RS02145 (BSK2_02145)	yczM	422826..422915 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
BSK2_RS02150 (BSK2_02150)	yczN	422997..423110 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
BSK2_RS02155 (BSK2_02155)	thrD	423264..424628 (-)	1365	WP_003234493.1	aspartate kinase	-
BSK2_RS02160 (BSK2_02160)	ceuB	425013..425963 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
BSK2_RS02165 (BSK2_02165)	yclO	425956..426903 (+)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=221726 BSK2_RS02135 WP_014475800.1 421472..422620(+) (rapC) [Bacillus subtilis strain GQJK2]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=221726 BSK2_RS02135 WP_014475800.1 421472..422620(+) (rapC) [Bacillus subtilis strain GQJK2]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTTGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568