Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SAS_RS09405 Genome accession   NC_002953
Coordinates   1910767..1911507 (-) Length   246 a.a.
NCBI ID   WP_000216877.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus MSSA476     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1905767..1916507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAS_RS09380 (SAS1754) hemH 1906643..1907566 (-) 924 WP_000162881.1 ferrochelatase -
  SAS_RS09385 (SAS1755) hemE 1907624..1908661 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  SAS_RS09390 - 1908651..1908761 (-) 111 WP_001790154.1 hypothetical protein -
  SAS_RS09395 (SAS1756) traP 1908924..1909427 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  SAS_RS09400 (SAS1757) ecsB 1909551..1910774 (-) 1224 WP_000551840.1 ABC transporter permease EcsB -
  SAS_RS09405 (SAS1758) pptA 1910767..1911507 (-) 741 WP_000216877.1 ABC transporter ATP-binding protein EcsA Regulator
  SAS_RS09410 (SAS1759) - 1911641..1912063 (+) 423 WP_000004981.1 HIT family protein -
  SAS_RS09415 (SAS1760) - 1912205..1912570 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  SAS_RS09420 (SAS1761) - 1913303..1913860 (+) 558 WP_000477957.1 DUF3267 domain-containing protein -
  SAS_RS09425 (SAS1762) - 1914065..1915027 (+) 963 WP_000782121.1 foldase protein PrsA -
  SAS_RS09430 (SAS1763) yhaM 1915148..1916089 (-) 942 WP_001244179.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27729.14 Da        Isoelectric Point: 4.7455

>NTDB_id=22171 SAS_RS09405 WP_000216877.1 1910767..1911507(-) (pptA) [Staphylococcus aureus subsp. aureus MSSA476]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRVMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=22171 SAS_RS09405 WP_000216877.1 1910767..1911507(-) (pptA) [Staphylococcus aureus subsp. aureus MSSA476]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGTAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

97.154

0.553
  pptA Streptococcus thermophilus LMD-9

55.649

97.154

0.541

Multiple sequence alignment