Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BLMD_RS10220 | Genome accession | NZ_CP020352 |
| Coordinates | 2009440..2009868 (+) | Length | 142 a.a. |
| NCBI ID | WP_020451590.1 | Uniprot ID | A0A6N2GRD1 |
| Organism | Bacillus paralicheniformis strain MDJK30 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2004440..2014868
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLMD_RS10190 (BLMD_10190) | - | 2004696..2005304 (+) | 609 | WP_020451585.1 | flavin reductase family protein | - |
| BLMD_RS10195 (BLMD_10195) | wrbA | 2005506..2006120 (+) | 615 | WP_020451586.1 | NAD(P)H:quinone oxidoreductase | - |
| BLMD_RS22115 | - | 2006431..2006571 (+) | 141 | WP_023857597.1 | hypothetical protein | - |
| BLMD_RS10200 (BLMD_10200) | - | 2006564..2007397 (+) | 834 | WP_020451587.1 | prohibitin family protein | - |
| BLMD_RS10205 (BLMD_10205) | - | 2007486..2008247 (+) | 762 | WP_025809940.1 | hypothetical protein | - |
| BLMD_RS10210 (BLMD_10210) | - | 2008307..2009146 (+) | 840 | WP_026579651.1 | thymidylate synthase | - |
| BLMD_RS10220 (BLMD_10220) | nucA/comI | 2009440..2009868 (+) | 429 | WP_020451590.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| BLMD_RS10230 (BLMD_10230) | lexA | 2010068..2010691 (-) | 624 | WP_020451591.1 | transcriptional repressor LexA | - |
| BLMD_RS10235 (BLMD_10235) | yneA | 2010843..2011154 (+) | 312 | WP_020451592.1 | cell division suppressor protein YneA | - |
| BLMD_RS10240 (BLMD_10240) | - | 2011173..2011820 (+) | 648 | WP_020451593.1 | recombinase family protein | - |
| BLMD_RS10245 (BLMD_10245) | - | 2011886..2012119 (+) | 234 | WP_020451594.1 | DUF896 domain-containing protein | - |
| BLMD_RS10250 (BLMD_10250) | tkt | 2012283..2014286 (+) | 2004 | WP_023857593.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15420.36 Da Isoelectric Point: 7.8950
>NTDB_id=221637 BLMD_RS10220 WP_020451590.1 2009440..2009868(+) (nucA/comI) [Bacillus paralicheniformis strain MDJK30]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDVLYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSDYADGTRILFIVR
Nucleotide
Download Length: 429 bp
>NTDB_id=221637 BLMD_RS10220 WP_020451590.1 2009440..2009868(+) (nucA/comI) [Bacillus paralicheniformis strain MDJK30]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACCGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAAGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGAGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTGCTGCTTGGGCTTTCGGGAGGGGCTGCATATTCTCC
TCAGCATGCCGAAGGCGCTGCAAGGTATGATGACGTATTGTATTTTCCGGCATCGCGCTATCCTGAAACCGGTGCTCATA
TAAGCGATGCGATCAAAGCGGGCCATTCAGATGTCTGCACAATTGAAAGATCTGGAGCGGATAAGCGCCGTCAGGAATCA
TTAAAAGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGAGGAAAAGGAGC
GTCGGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGATTACGCTGACG
GGACGAGAATTTTGTTTATCGTTCGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
59.524 |
88.732 |
0.528 |