Detailed information NTG0221636

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BS11774_RS07585
• Genome accession: NZ_CP026010
• Coordinates: 1422516..1423637 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ATCC 11774
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1417516..1428637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS11774_RS07560 (BS11774_07530)	ycdA	1417521..1418585 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
BS11774_RS07565	-	1418608..1418739 (-)	132	WP_003246334.1	hypothetical protein	-
BS11774_RS07570 (BS11774_07535)	ycdB	1418913..1420334 (+)	1422	WP_038427323.1	YcdB/YcdC domain-containing protein	-
BS11774_RS07575 (BS11774_07540)	ycdC	1420521..1421882 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
BS11774_RS07580 (BS11774_07545)	cwlK	1421890..1422393 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
BS11774_RS07585 (BS11774_07550)	rapF	1422516..1423637 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
BS11774_RS07590 (BS11774_07555)	ycdF	1423744..1424519 (+)	776	Protein_1436	SDR family oxidoreductase	-
BS11774_RS07595 (BS11774_07560)	ycdG	1424544..1426229 (+)	1686	WP_038427325.1	alpha-glucosidase	-
BS11774_RS07600 (BS11774_07565)	znuA	1426417..1427376 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
BS11774_RS07605 (BS11774_07570)	znuC	1427431..1428126 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=221636 BS11774_RS07585 WP_069837225.1 1422516..1423637(+) (rapF) [Bacillus subtilis strain ATCC 11774]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=221636 BS11774_RS07585 WP_069837225.1 1422516..1423637(+) (rapF) [Bacillus subtilis strain ATCC 11774]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTATACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405