Detailed information NTG0221620

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BLMD_RS06530
• Genome accession: NZ_CP020352
• Coordinates: 1308851..1309804 (+)
• Length: 317 a.a.
• NCBI ID: WP_080131315.1
• Uniprot ID: -
• Organism: Bacillus paralicheniformis strain MDJK30
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1303851..1314804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLMD_RS06500 (BLMD_06500)	argF	1304719..1305669 (+)	951	WP_020450924.1	ornithine carbamoyltransferase	-
BLMD_RS06505 (BLMD_06505)	-	1305707..1306519 (-)	813	WP_080131314.1	undecaprenyl-diphosphate phosphatase	-
BLMD_RS06510 (BLMD_06510)	-	1306701..1306880 (+)	180	WP_003180573.1	YjzC family protein	-
BLMD_RS06515 (BLMD_06515)	-	1306944..1307138 (-)	195	WP_009328851.1	YjzD family protein	-
BLMD_RS06520 (BLMD_06520)	-	1307370..1308104 (+)	735	WP_023856643.1	hypothetical protein	-
BLMD_RS06525 (BLMD_06525)	-	1308190..1308765 (+)	576	WP_003180580.1	hypothetical protein	-
BLMD_RS06530 (BLMD_06530)	med	1308851..1309804 (+)	954	WP_080131315.1	BMP family ABC transporter substrate-binding protein	Regulator
BLMD_RS06535 (BLMD_06535)	comZ	1309815..1310000 (+)	186	WP_011197761.1	ComZ family protein	Regulator
BLMD_RS06540 (BLMD_06540)	-	1310053..1310295 (-)	243	WP_003180586.1	hypothetical protein	-
BLMD_RS06545 (BLMD_06545)	-	1310464..1311402 (+)	939	WP_003180588.1	beta-ketoacyl-ACP synthase III	-
BLMD_RS06550 (BLMD_06550)	fabF	1311424..1312662 (+)	1239	WP_003180590.1	beta-ketoacyl-ACP synthase II	-
BLMD_RS06555 (BLMD_06555)	-	1312748..1313536 (+)	789	WP_080131316.1	DUF2268 domain-containing protein	-
BLMD_RS06560 (BLMD_06560)	-	1313728..1314702 (+)	975	WP_003180594.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35332.05 Da
• Isoelectric Point: 4.7709

>NTDB_id=221620 BLMD_RS06530 WP_080131315.1 1308851..1309804(+) (med) [Bacillus paralicheniformis strain MDJK30]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGAAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide

• Length: 954 bp

>NTDB_id=221620 BLMD_RS06530 WP_080131315.1 1308851..1309804(+) (med) [Bacillus paralicheniformis strain MDJK30]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGCAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGATATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-314)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	67.834	99.054	0.672