Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | B4U62_RS02000 | Genome accession | NZ_CP020102 |
| Coordinates | 371772..372170 (-) | Length | 132 a.a. |
| NCBI ID | WP_003246342.1 | Uniprot ID | A0AAE2SGH7 |
| Organism | Bacillus subtilis strain NCIB 3610 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 366772..377170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4U62_RS01975 (B4U62_01975) | yckA | 367348..368028 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| B4U62_RS01980 (B4U62_01980) | yckB | 368038..368901 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| B4U62_RS22725 | - | 369063..369260 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| B4U62_RS01985 (B4U62_01985) | yckC | 369279..369734 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| B4U62_RS01990 (B4U62_01990) | yckD | 369816..370148 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| B4U62_RS01995 (B4U62_01995) | bglC | 370302..371735 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| B4U62_RS02000 (B4U62_02000) | nin/comJ | 371772..372170 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| B4U62_RS02005 (B4U62_02005) | nucA/comI | 372197..372646 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| B4U62_RS02010 (B4U62_02010) | tlpC | 372814..374535 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| B4U62_RS02015 (B4U62_02015) | hxlB | 374646..375203 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| B4U62_RS02020 (B4U62_02020) | hxlA | 375209..375841 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| B4U62_RS02025 (B4U62_02025) | hxlR | 376074..376436 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14996.95 Da Isoelectric Point: 4.8991
>NTDB_id=221130 B4U62_RS02000 WP_003246342.1 371772..372170(-) (nin/comJ) [Bacillus subtilis strain NCIB 3610]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=221130 B4U62_RS02000 WP_003246342.1 371772..372170(-) (nin/comJ) [Bacillus subtilis strain NCIB 3610]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |