Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | B4U62_RS00245 | Genome accession | NZ_CP020102 |
| Coordinates | 44885..45175 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain NCIB 3610 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39885..50175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4U62_RS00205 (B4U62_00205) | darA | 39908..40237 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| B4U62_RS00210 (B4U62_00210) | yaaR | 40250..40690 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| B4U62_RS00215 (B4U62_00215) | holB | 40702..41691 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| B4U62_RS00220 (B4U62_00220) | ricT | 41694..42521 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| B4U62_RS00225 (B4U62_00225) | yabA | 42536..42895 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| B4U62_RS00230 (B4U62_00230) | trmNF | 42954..43697 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| B4U62_RS00235 (B4U62_00235) | yazA | 43684..43983 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| B4U62_RS00240 (B4U62_00240) | rsmI | 43958..44836 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| B4U62_RS00245 (B4U62_00245) | abrB | 44885..45175 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| B4U62_RS00250 (B4U62_00250) | metG | 45670..47664 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| B4U62_RS00255 (B4U62_00255) | dayD | 47743..48510 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| B4U62_RS00260 (B4U62_00260) | yabE | 48666..49979 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=221126 B4U62_RS00245 WP_003226760.1 44885..45175(-) (abrB) [Bacillus subtilis strain NCIB 3610]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=221126 B4U62_RS00245 WP_003226760.1 44885..45175(-) (abrB) [Bacillus subtilis strain NCIB 3610]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |