Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   B2J95_RS09060 Genome accession   NZ_CP020089
Coordinates   1856078..1856704 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain PIMB10EC27     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1851078..1861704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2J95_RS09040 (B2J95_08995) - 1851478..1853238 (-) 1761 WP_013097259.1 Lon protease family protein -
  B2J95_RS09045 (B2J95_09000) matP 1853425..1853877 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  B2J95_RS09050 (B2J95_09005) ompA 1853941..1854996 (-) 1056 WP_044158562.1 porin OmpA -
  B2J95_RS09055 (B2J95_09010) sulA 1855351..1855860 (-) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  B2J95_RS09060 (B2J95_09015) sxy/tfoX 1856078..1856704 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  B2J95_RS09065 (B2J95_09020) yccS 1856661..1858823 (-) 2163 WP_058678399.1 YccS family putative transporter -
  B2J95_RS09070 (B2J95_09025) - 1858843..1859289 (-) 447 WP_013097253.1 YccF domain-containing protein -
  B2J95_RS09075 (B2J95_09030) helD 1859412..1861466 (+) 2055 WP_057072035.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=221002 B2J95_RS09060 WP_013097255.1 1856078..1856704(+) (sxy/tfoX) [Enterobacter cloacae strain PIMB10EC27]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=221002 B2J95_RS09060 WP_013097255.1 1856078..1856704(+) (sxy/tfoX) [Enterobacter cloacae strain PIMB10EC27]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATCCAGCGCTACCAGCGAAACCGACTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTCCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAGAAT
AAAGCGCTCAGTATTAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAGGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment