Detailed information NTG0220941

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CXV43_RS22185
• Genome accession: NZ_CP025903
• Coordinates: 4484939..4485964 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 300709
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4479939..4490964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXV43_RS22155	zapB	4480023..4480268 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
CXV43_RS22160	rraA	4480353..4480838 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CXV43_RS22165	menA	4480931..4481857 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CXV43_RS22170	hslU	4481924..4483255 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
CXV43_RS22175	hslV	4483265..4483795 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
CXV43_RS22180	ftsN	4483888..4484847 (-)	960	WP_000068828.1	cell division protein FtsN	-
CXV43_RS22185	cytR	4484939..4485964 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CXV43_RS22190	priA	4486120..4488318 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
CXV43_RS22195	rpmE	4488521..4488733 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
CXV43_RS22200	yiiX	4488794..4489402 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
CXV43_RS22205	metJ	4489586..4489903 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=220941 CXV43_RS22185 WP_000644904.1 4484939..4485964(-) (cytR) [Escherichia coli strain 300709]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=220941 CXV43_RS22185 WP_000644904.1 4484939..4485964(-) (cytR) [Escherichia coli strain 300709]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628