Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   B5D85_RS09820 Genome accession   NZ_CP020082
Coordinates   1889577..1890353 (+) Length   258 a.a.
NCBI ID   WP_014407987.1    Uniprot ID   A0A4U9TLU5
Organism   Streptococcus pyogenes strain STAB120304     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1884577..1895353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5D85_RS09800 (B5D85_09765) - 1886486..1887260 (-) 775 Protein_1836 IS30 family transposase -
  B5D85_RS09810 (B5D85_09775) rlmH 1887655..1888134 (-) 480 WP_053039081.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  B5D85_RS09815 (B5D85_09780) htrA 1888265..1889488 (+) 1224 WP_002994926.1 S1C family serine protease Regulator
  B5D85_RS09820 (B5D85_09785) spo0J 1889577..1890353 (+) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29042.85 Da        Isoelectric Point: 10.3100

>NTDB_id=220940 B5D85_RS09820 WP_014407987.1 1889577..1890353(+) (spo0J) [Streptococcus pyogenes strain STAB120304]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=220940 B5D85_RS09820 WP_014407987.1 1889577..1890353(+) (spo0J) [Streptococcus pyogenes strain STAB120304]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9TLU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585

Multiple sequence alignment