Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   B5D85_RS07835 Genome accession   NZ_CP020082
Coordinates   1475722..1476447 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain STAB120304     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1470722..1481447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5D85_RS07800 (B5D85_07770) rnpM 1470756..1471052 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  B5D85_RS07805 (B5D85_07775) nusA 1471068..1472225 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  B5D85_RS07810 (B5D85_07780) rimP 1472400..1472936 (-) 537 WP_172841025.1 ribosome maturation factor RimP -
  B5D85_RS07820 (B5D85_07790) trmB 1473195..1473830 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  B5D85_RS07825 (B5D85_07795) ccrZ 1473830..1474621 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  B5D85_RS07830 (B5D85_07800) - 1474685..1475719 (-) 1035 WP_023610531.1 ABC transporter permease -
  B5D85_RS07835 (B5D85_07805) pptA 1475722..1476447 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  B5D85_RS07840 (B5D85_07810) - 1476519..1476938 (+) 420 WP_011285081.1 HIT family protein -
  B5D85_RS07845 (B5D85_07815) - 1476935..1477291 (+) 357 WP_020905404.1 hypothetical protein -
  B5D85_RS07850 (B5D85_07820) brpA 1477402..1478676 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  B5D85_RS07855 (B5D85_07825) - 1478685..1479209 (-) 525 WP_030126880.1 GNAT family N-acetyltransferase -
  B5D85_RS07860 (B5D85_07830) tsaE 1479184..1479645 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  B5D85_RS07865 (B5D85_07835) - 1479799..1481259 (-) 1461 WP_023609915.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=220930 B5D85_RS07835 WP_002983379.1 1475722..1476447(-) (pptA) [Streptococcus pyogenes strain STAB120304]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=220930 B5D85_RS07835 WP_002983379.1 1475722..1476447(-) (pptA) [Streptococcus pyogenes strain STAB120304]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment