Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | Vc3S01_RS20950 | Genome accession | NZ_CP020077 |
| Coordinates | 733190..734287 (+) | Length | 365 a.a. |
| NCBI ID | WP_038889042.1 | Uniprot ID | A0A812H8E7 |
| Organism | Vibrio campbellii strain 20130629003S01 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 728190..739287
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Vc3S01_RS20920 (Vc3S01_A0710) | - | 728664..729398 (+) | 735 | WP_138058884.1 | hypothetical protein | - |
| Vc3S01_RS20925 (Vc3S01_A0712) | - | 729517..730853 (-) | 1337 | Protein_682 | MATE family efflux transporter | - |
| Vc3S01_RS20930 (Vc3S01_A0713) | - | 730977..731291 (-) | 315 | WP_005373603.1 | DUF496 family protein | - |
| Vc3S01_RS20935 (Vc3S01_A0714) | - | 731530..731733 (+) | 204 | WP_005433391.1 | hypothetical protein | - |
| Vc3S01_RS20940 (Vc3S01_A0715) | - | 731827..732480 (+) | 654 | WP_050920274.1 | YceH family protein | - |
| Vc3S01_RS20945 (Vc3S01_A0716) | - | 732477..732791 (+) | 315 | WP_005433435.1 | GIY-YIG nuclease family protein | - |
| Vc3S01_RS20950 (Vc3S01_A0717) | luxP | 733190..734287 (+) | 1098 | WP_038889042.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| Vc3S01_RS20955 (Vc3S01_A0718) | luxQ | 734287..736866 (+) | 2580 | WP_077201887.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| Vc3S01_RS20960 (Vc3S01_A0719) | - | 736979..737641 (-) | 663 | WP_077201886.1 | PilZ domain-containing protein | - |
| Vc3S01_RS20965 (Vc3S01_A0720) | - | 737735..738661 (-) | 927 | WP_077201885.1 | DMT family transporter | - |
| Vc3S01_RS20970 (Vc3S01_A0721) | - | 738811..739266 (+) | 456 | WP_005532544.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41451.79 Da Isoelectric Point: 5.4779
>NTDB_id=220880 Vc3S01_RS20950 WP_038889042.1 733190..734287(+) (luxP) [Vibrio campbellii strain 20130629003S01]
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=220880 Vc3S01_RS20950 WP_038889042.1 733190..734287(+) (luxP) [Vibrio campbellii strain 20130629003S01]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGCCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGCTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCACTAATGGAAGCGCTTAAGAGTAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAATACCAAATTGATCTTGCAAAATATT
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGACG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTGGCATTGGGTGCAGTAGACGCACTTGCCGAGTTGGGACGTGAAGACATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGATACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGCCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGCTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCACTAATGGAAGCGCTTAAGAGTAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAATACCAAATTGATCTTGCAAAATATT
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGACG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTGGCATTGGGTGCAGTAGACGCACTTGCCGAGTTGGGACGTGAAGACATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGATACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
63.462 |
99.726 |
0.633 |