Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | B5D75_RS05180 | Genome accession | NZ_CP020045 |
| Coordinates | 1009332..1009634 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain ATCC 35925 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1004332..1014634
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5D75_RS05155 (B5D75_05155) | rpsR | 1004694..1004954 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| B5D75_RS05160 (B5D75_05160) | lon | 1005015..1007390 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| B5D75_RS05165 (B5D75_05165) | bamD | 1007407..1008054 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| B5D75_RS05170 (B5D75_05170) | fliW | 1008215..1008604 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| B5D75_RS05175 (B5D75_05175) | proC | 1008604..1009335 (+) | 732 | WP_044306077.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| B5D75_RS05180 (B5D75_05180) | ctsT | 1009332..1009634 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| B5D75_RS05185 (B5D75_05185) | - | 1009631..1010293 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| B5D75_RS05190 (B5D75_05190) | - | 1010290..1010742 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| B5D75_RS05195 (B5D75_05195) | hemD | 1010739..1011368 (-) | 630 | WP_044306078.1 | uroporphyrinogen-III synthase | - |
| B5D75_RS05200 (B5D75_05200) | thiE | 1011346..1011978 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| B5D75_RS05205 (B5D75_05205) | thiD | 1011968..1012780 (-) | 813 | WP_044306378.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| B5D75_RS05210 (B5D75_05210) | - | 1012777..1013463 (-) | 687 | WP_044306079.1 | 3-methyladenine DNA glycosylase | - |
| B5D75_RS05215 (B5D75_05215) | - | 1013460..1014221 (-) | 762 | WP_044306080.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=220646 B5D75_RS05180 WP_002855822.1 1009332..1009634(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain ATCC 35925]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=220646 B5D75_RS05180 WP_002855822.1 1009332..1009634(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain ATCC 35925]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |