Detailed information NTG0220606

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: Vp2S01_RS24120
• Genome accession: NZ_CP020035
• Coordinates: 1415174..1416271 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20130629002S01
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1410174..1421271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vp2S01_RS24105 (Vp2S01_A1307)	-	1410838..1411893 (-)	1056	WP_025623626.1	HlyD family secretion protein	-
Vp2S01_RS24110 (Vp2S01_A1308)	-	1411931..1412386 (-)	456	WP_025525184.1	MarR family transcriptional regulator	-
Vp2S01_RS24115 (Vp2S01_A1309)	luxQ	1412598..1415174 (-)	2577	WP_025521028.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
Vp2S01_RS24120 (Vp2S01_A1310)	luxP	1415174..1416271 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
Vp2S01_RS24125 (Vp2S01_A1311)	-	1416623..1416943 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
Vp2S01_RS24130 (Vp2S01_A1312)	-	1416940..1417590 (-)	651	WP_005499314.1	YceH family protein	-
Vp2S01_RS24135 (Vp2S01_A1313)	-	1417767..1417982 (-)	216	WP_005477197.1	hypothetical protein	-
Vp2S01_RS24145 (Vp2S01_A1315)	-	1418310..1418624 (+)	315	WP_005453573.1	DUF496 family protein	-
Vp2S01_RS24150 (Vp2S01_A1316)	-	1418747..1420084 (+)	1338	WP_031856089.1	MATE family efflux transporter	-
Vp2S01_RS24155 (Vp2S01_A1317)	-	1420158..1421135 (-)	978	WP_015313433.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=220606 Vp2S01_RS24120 WP_005463467.1 1415174..1416271(-) (luxP) [Vibrio parahaemolyticus strain 20130629002S01]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=220606 Vp2S01_RS24120 WP_005463467.1 1415174..1416271(-) (luxP) [Vibrio parahaemolyticus strain 20130629002S01]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGCCCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGTGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCTGGGTATGAAGCTGCAAAAGCCAGTTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644