Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJE_RS06080 | Genome accession | NC_003912 |
| Coordinates | 1137087..1137389 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni RM1221 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1132087..1142389
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJE_RS06055 (CJE1215) | rpsR | 1132450..1132710 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJE_RS06060 (CJE1216) | lon | 1132770..1135145 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| CJE_RS06065 (CJE1217) | - | 1135162..1135809 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| CJE_RS06070 (CJE1218) | fliW | 1135970..1136359 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJE_RS06075 (CJE1219) | proC | 1136359..1137090 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJE_RS06080 (CJE1220) | ctsT | 1137087..1137389 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJE_RS06085 (CJE1221) | - | 1137386..1138048 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJE_RS06090 (CJE1222) | - | 1138045..1138497 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJE_RS06095 (CJE1223) | hemD | 1138494..1139123 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| CJE_RS06100 (CJE1224) | thiE | 1139101..1139733 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CJE_RS06105 (CJE1225) | thiD | 1139723..1140535 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJE_RS06110 (CJE1226) | - | 1140532..1141218 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJE_RS06115 (CJE1227) | - | 1141215..1141976 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=22044 CJE_RS06080 WP_002853046.1 1137087..1137389(+) (ctsT) [Campylobacter jejuni RM1221]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=22044 CJE_RS06080 WP_002853046.1 1137087..1137389(+) (ctsT) [Campylobacter jejuni RM1221]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |