Detailed information NTG0220342

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BS21228_RS12255
• Genome accession: NZ_CP020023
• Coordinates: 2282526..2283638 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ATCC 21228
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2277526..2288638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS21228_RS12230 (BS21228_12185)	rnpA	2278236..2278586 (-)	351	WP_014481515.1	ribonuclease P protein component	-
BS21228_RS12235 (BS21228_12190)	rpmH	2278738..2278872 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
BS21228_RS12240 (BS21228_12195)	dnaA	2279499..2280839 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
BS21228_RS12245 (BS21228_12200)	dnaN	2281028..2282164 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
BS21228_RS12250 (BS21228_12205)	rlbA	2282295..2282510 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
BS21228_RS12255 (BS21228_12210)	recF	2282526..2283638 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
BS21228_RS12260 (BS21228_12215)	remB	2283656..2283901 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
BS21228_RS12265 (BS21228_12220)	gyrB	2283956..2285872 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BS21228_RS12270 (BS21228_12225)	gyrA	2286083..2288548 (+)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=220342 BS21228_RS12255 WP_014478578.1 2282526..2283638(+) (recF) [Bacillus subtilis strain ATCC 21228]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=220342 BS21228_RS12255 WP_014478578.1 2282526..2283638(+) (recF) [Bacillus subtilis strain ATCC 21228]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995