Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BS21228_RS03595 | Genome accession | NZ_CP020023 |
| Coordinates | 627577..627987 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain ATCC 21228 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 622577..632987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS21228_RS03565 (BS21228_03530) | - | 622666..622806 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| BS21228_RS03570 (BS21228_03535) | yqeF | 623112..623843 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| BS21228_RS03575 (BS21228_03540) | cwlH | 624095..624847 (-) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| BS21228_RS03580 (BS21228_03545) | yqeD | 625048..625659 (+) | 612 | WP_105778739.1 | TVP38/TMEM64 family protein | - |
| BS21228_RS03585 (BS21228_03550) | gnd | 625678..626571 (-) | 894 | WP_014480320.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| BS21228_RS03590 (BS21228_03555) | yqeB | 626822..627544 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| BS21228_RS03595 (BS21228_03560) | nucA/comI | 627577..627987 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| BS21228_RS03600 (BS21228_03565) | sigK | 628183..628911 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| BS21228_RS22700 | - | 628911..629009 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| BS21228_RS03605 (BS21228_03570) | - | 629201..630448 (+) | 1248 | WP_031600262.1 | IS256-like element ISBsu2 family transposase | - |
| BS21228_RS03610 (BS21228_03575) | - | 630471..630595 (-) | 125 | Protein_722 | recombinase family protein | - |
| BS21228_RS03615 (BS21228_03580) | fumC | 630814..632202 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=220315 BS21228_RS03595 WP_009967785.1 627577..627987(-) (nucA/comI) [Bacillus subtilis strain ATCC 21228]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=220315 BS21228_RS03595 WP_009967785.1 627577..627987(-) (nucA/comI) [Bacillus subtilis strain ATCC 21228]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |