Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BS21228_RS03060 | Genome accession | NZ_CP020023 |
| Coordinates | 532795..533832 (-) | Length | 345 a.a. |
| NCBI ID | WP_031600685.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain ATCC 21228 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 527795..538832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS21228_RS03010 (BS21228_02975) | tasA | 527893..528678 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| BS21228_RS03015 (BS21228_02980) | sipW | 528742..529314 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| BS21228_RS03020 (BS21228_02985) | tapA | 529298..530059 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BS21228_RS03025 (BS21228_02990) | yqzG | 530331..530657 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| BS21228_RS03030 (BS21228_02995) | spoIITA | 530699..530878 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BS21228_RS03035 (BS21228_03000) | comGG | 530949..531323 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BS21228_RS03040 (BS21228_03005) | comGF | 531324..531707 (-) | 384 | WP_014480254.1 | ComG operon protein ComGF | Machinery gene |
| BS21228_RS03045 (BS21228_03010) | comGE | 531733..532080 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| BS21228_RS03050 (BS21228_03015) | comGD | 532064..532495 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| BS21228_RS03055 (BS21228_03020) | comGC | 532485..532781 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| BS21228_RS03060 (BS21228_03025) | comGB | 532795..533832 (-) | 1038 | WP_031600685.1 | comG operon protein ComGB | Machinery gene |
| BS21228_RS03065 (BS21228_03030) | comGA | 533819..534889 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| BS21228_RS03070 (BS21228_03035) | - | 535101..535298 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| BS21228_RS03075 (BS21228_03040) | corA | 535300..536253 (-) | 954 | WP_014480260.1 | magnesium transporter CorA | - |
| BS21228_RS03080 (BS21228_03045) | yqhB | 536395..537723 (+) | 1329 | WP_014480261.1 | hemolysin family protein | - |
| BS21228_RS03085 (BS21228_03050) | rsbRD | 537776..538612 (-) | 837 | WP_014480262.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39592.99 Da Isoelectric Point: 9.6259
>NTDB_id=220309 BS21228_RS03060 WP_031600685.1 532795..533832(-) (comGB) [Bacillus subtilis strain ATCC 21228]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=220309 BS21228_RS03060 WP_031600685.1 532795..533832(-) (comGB) [Bacillus subtilis strain ATCC 21228]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |