Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | B2J85_RS01230 | Genome accession | NZ_CP020017 |
| Coordinates | 270319..272136 (+) | Length | 605 a.a. |
| NCBI ID | WP_094243275.1 | Uniprot ID | - |
| Organism | Tetragenococcus halophilus strain KUD23 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 265319..277136
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B2J85_RS01210 | - | 266021..267732 (+) | 1712 | Protein_234 | ABC transporter ATP-binding protein | - |
| B2J85_RS01215 | spxA | 267892..268290 (+) | 399 | WP_014124069.1 | transcriptional regulator SpxA | - |
| B2J85_RS01220 | - | 268438..269154 (+) | 717 | WP_094243273.1 | adaptor protein MecA | - |
| B2J85_RS01225 | - | 269263..270231 (+) | 969 | WP_094243274.1 | competence protein CoiA | - |
| B2J85_RS01230 | pepF | 270319..272136 (+) | 1818 | WP_094243275.1 | oligoendopeptidase F | Regulator |
| B2J85_RS01235 | - | 272218..272793 (-) | 576 | WP_061840319.1 | CYTH domain-containing protein | - |
| B2J85_RS01240 | - | 272948..273622 (+) | 675 | WP_014124074.1 | GTP pyrophosphokinase | - |
| B2J85_RS01245 | - | 273615..274421 (+) | 807 | WP_061840320.1 | NAD kinase | - |
| B2J85_RS01250 | - | 274554..275456 (+) | 903 | WP_069029152.1 | RluA family pseudouridine synthase | - |
| B2J85_RS01255 | mgtE | 275462..276826 (+) | 1365 | WP_041591768.1 | magnesium transporter | - |
Sequence
Protein
Download Length: 605 a.a. Molecular weight: 69954.05 Da Isoelectric Point: 4.8047
>NTDB_id=220122 B2J85_RS01230 WP_094243275.1 270319..272136(+) (pepF) [Tetragenococcus halophilus strain KUD23]
MSEAKKLPKRDEVAENLTWDLTKIFKNDQAFEKAFSALQEKLQYADSYRGTLGDGPQAFLAALEYLLDVSRQLETVYVYS
HLKNDQDTSNTIYQALNSRAESLVTQADEKLSFFEPELLSLSNERIWQYFKDEPKLEIYRHFVEQIVANRAHVLPKEQEA
LLAGAGEIFGASSNTFSIMNNADFVFPVIEDENGEKVQLSHGVYGQLMENTDRLVRENAFKGLYSVYKQFANTLASTLNS
HIKTHNYQAKVRHYHSAREAALSSNHIPESVYDHLVDVVNKNLNLLHRYMGLRKRLLQVEKLHMYDVYTPLLGEAPISFT
YDQAVDKAFEALAPMGEEYLSVVKKAFDERWIDVVENQGKRSGAYSSGTYDTNPYILLNWHDTLDHLFTLVHEMGHSVHS
YFTQNNQPYVYGDYSIFLAEIASTTNENILTEHLLQTENDPRVRAYVLNHYLDGFKGTVFRQTQFAEFEHFMHTEDAKGT
PLTSEFLNEHYGELNRRYYGDEMEDDPEIHLEWSRIPHFYYNYYVFQYATGFSAASALSQKILSEDSSALDRYLTYLKSG
DSDYPIEVMKKAGVDMTKSDYLEDAMHVFEERLNELELLVDELEK
MSEAKKLPKRDEVAENLTWDLTKIFKNDQAFEKAFSALQEKLQYADSYRGTLGDGPQAFLAALEYLLDVSRQLETVYVYS
HLKNDQDTSNTIYQALNSRAESLVTQADEKLSFFEPELLSLSNERIWQYFKDEPKLEIYRHFVEQIVANRAHVLPKEQEA
LLAGAGEIFGASSNTFSIMNNADFVFPVIEDENGEKVQLSHGVYGQLMENTDRLVRENAFKGLYSVYKQFANTLASTLNS
HIKTHNYQAKVRHYHSAREAALSSNHIPESVYDHLVDVVNKNLNLLHRYMGLRKRLLQVEKLHMYDVYTPLLGEAPISFT
YDQAVDKAFEALAPMGEEYLSVVKKAFDERWIDVVENQGKRSGAYSSGTYDTNPYILLNWHDTLDHLFTLVHEMGHSVHS
YFTQNNQPYVYGDYSIFLAEIASTTNENILTEHLLQTENDPRVRAYVLNHYLDGFKGTVFRQTQFAEFEHFMHTEDAKGT
PLTSEFLNEHYGELNRRYYGDEMEDDPEIHLEWSRIPHFYYNYYVFQYATGFSAASALSQKILSEDSSALDRYLTYLKSG
DSDYPIEVMKKAGVDMTKSDYLEDAMHVFEERLNELELLVDELEK
Nucleotide
Download Length: 1818 bp
>NTDB_id=220122 B2J85_RS01230 WP_094243275.1 270319..272136(+) (pepF) [Tetragenococcus halophilus strain KUD23]
ATGTCAGAAGCTAAAAAATTACCTAAACGAGACGAAGTGGCGGAAAATTTGACTTGGGATTTAACAAAAATCTTTAAAAA
TGACCAAGCATTTGAAAAAGCTTTTAGCGCGCTACAAGAAAAACTGCAGTATGCCGATTCCTATAGAGGAACTCTAGGGG
ATGGCCCACAAGCATTTTTAGCTGCACTTGAATATTTATTAGATGTTTCTCGTCAATTAGAAACTGTCTACGTGTATAGT
CATTTAAAAAATGACCAAGATACCTCAAATACAATTTACCAAGCGCTTAATTCTAGAGCAGAGTCCTTGGTAACACAAGC
AGATGAAAAATTATCTTTTTTTGAACCCGAATTATTATCGTTAAGTAATGAAAGGATTTGGCAGTATTTTAAAGACGAAC
CAAAACTTGAAATTTATCGACATTTTGTTGAACAAATCGTAGCAAATCGTGCGCACGTTTTGCCAAAAGAACAAGAAGCT
TTATTAGCAGGCGCTGGAGAGATCTTTGGTGCTTCTAGTAACACTTTTTCTATTATGAACAATGCTGATTTTGTTTTTCC
TGTCATTGAAGATGAAAATGGAGAAAAAGTACAGCTTTCTCATGGTGTTTATGGACAATTAATGGAAAACACTGACCGTT
TAGTGCGTGAGAATGCTTTTAAAGGCCTATATAGTGTATACAAGCAGTTTGCTAACACCCTTGCTTCTACACTGAATTCA
CATATTAAAACACATAATTATCAAGCAAAAGTGCGCCATTACCATTCAGCTAGAGAAGCTGCTTTATCAAGCAACCATAT
TCCAGAAAGCGTTTATGATCATTTAGTAGATGTGGTCAATAAAAACTTAAACCTTCTTCATCGCTATATGGGACTTAGGA
AACGTTTATTACAAGTGGAAAAATTGCATATGTATGATGTTTACACGCCACTTTTAGGCGAAGCTCCTATTAGTTTTACT
TATGACCAGGCGGTAGATAAAGCGTTTGAAGCACTAGCGCCTATGGGAGAAGAGTATTTAAGTGTCGTGAAAAAGGCCTT
TGATGAACGTTGGATCGATGTTGTAGAAAATCAAGGAAAACGTAGCGGTGCTTATTCTTCAGGTACTTATGATACCAATC
CTTATATTTTATTAAATTGGCATGATACATTGGATCATTTATTTACCCTGGTACATGAAATGGGGCATAGTGTTCATAGT
TACTTTACCCAAAATAATCAACCTTATGTATATGGAGATTACTCAATTTTCTTAGCAGAGATTGCTTCAACTACCAATGA
AAATATCTTGACTGAACATCTTTTACAAACAGAAAATGACCCACGCGTTCGGGCATATGTATTAAATCACTATTTAGACG
GTTTTAAAGGTACAGTTTTCCGTCAAACACAATTTGCGGAGTTTGAGCATTTTATGCACACTGAGGACGCTAAAGGCACA
CCATTAACAAGTGAGTTTTTAAATGAGCATTATGGAGAGTTGAATAGACGATATTATGGTGATGAAATGGAAGACGATCC
AGAAATACATCTTGAATGGTCGCGTATTCCTCATTTTTATTATAATTACTATGTGTTCCAATATGCGACAGGTTTTTCTG
CTGCTTCTGCCTTGTCACAAAAAATCTTATCAGAAGACTCGAGTGCCTTGGATCGTTATTTGACCTATCTAAAATCTGGT
GATAGTGATTATCCTATTGAAGTGATGAAAAAAGCTGGAGTGGATATGACAAAATCGGATTATTTAGAAGATGCGATGCA
TGTTTTTGAAGAGCGGTTAAATGAGTTAGAACTACTCGTTGATGAATTAGAAAAATAA
ATGTCAGAAGCTAAAAAATTACCTAAACGAGACGAAGTGGCGGAAAATTTGACTTGGGATTTAACAAAAATCTTTAAAAA
TGACCAAGCATTTGAAAAAGCTTTTAGCGCGCTACAAGAAAAACTGCAGTATGCCGATTCCTATAGAGGAACTCTAGGGG
ATGGCCCACAAGCATTTTTAGCTGCACTTGAATATTTATTAGATGTTTCTCGTCAATTAGAAACTGTCTACGTGTATAGT
CATTTAAAAAATGACCAAGATACCTCAAATACAATTTACCAAGCGCTTAATTCTAGAGCAGAGTCCTTGGTAACACAAGC
AGATGAAAAATTATCTTTTTTTGAACCCGAATTATTATCGTTAAGTAATGAAAGGATTTGGCAGTATTTTAAAGACGAAC
CAAAACTTGAAATTTATCGACATTTTGTTGAACAAATCGTAGCAAATCGTGCGCACGTTTTGCCAAAAGAACAAGAAGCT
TTATTAGCAGGCGCTGGAGAGATCTTTGGTGCTTCTAGTAACACTTTTTCTATTATGAACAATGCTGATTTTGTTTTTCC
TGTCATTGAAGATGAAAATGGAGAAAAAGTACAGCTTTCTCATGGTGTTTATGGACAATTAATGGAAAACACTGACCGTT
TAGTGCGTGAGAATGCTTTTAAAGGCCTATATAGTGTATACAAGCAGTTTGCTAACACCCTTGCTTCTACACTGAATTCA
CATATTAAAACACATAATTATCAAGCAAAAGTGCGCCATTACCATTCAGCTAGAGAAGCTGCTTTATCAAGCAACCATAT
TCCAGAAAGCGTTTATGATCATTTAGTAGATGTGGTCAATAAAAACTTAAACCTTCTTCATCGCTATATGGGACTTAGGA
AACGTTTATTACAAGTGGAAAAATTGCATATGTATGATGTTTACACGCCACTTTTAGGCGAAGCTCCTATTAGTTTTACT
TATGACCAGGCGGTAGATAAAGCGTTTGAAGCACTAGCGCCTATGGGAGAAGAGTATTTAAGTGTCGTGAAAAAGGCCTT
TGATGAACGTTGGATCGATGTTGTAGAAAATCAAGGAAAACGTAGCGGTGCTTATTCTTCAGGTACTTATGATACCAATC
CTTATATTTTATTAAATTGGCATGATACATTGGATCATTTATTTACCCTGGTACATGAAATGGGGCATAGTGTTCATAGT
TACTTTACCCAAAATAATCAACCTTATGTATATGGAGATTACTCAATTTTCTTAGCAGAGATTGCTTCAACTACCAATGA
AAATATCTTGACTGAACATCTTTTACAAACAGAAAATGACCCACGCGTTCGGGCATATGTATTAAATCACTATTTAGACG
GTTTTAAAGGTACAGTTTTCCGTCAAACACAATTTGCGGAGTTTGAGCATTTTATGCACACTGAGGACGCTAAAGGCACA
CCATTAACAAGTGAGTTTTTAAATGAGCATTATGGAGAGTTGAATAGACGATATTATGGTGATGAAATGGAAGACGATCC
AGAAATACATCTTGAATGGTCGCGTATTCCTCATTTTTATTATAATTACTATGTGTTCCAATATGCGACAGGTTTTTCTG
CTGCTTCTGCCTTGTCACAAAAAATCTTATCAGAAGACTCGAGTGCCTTGGATCGTTATTTGACCTATCTAAAATCTGGT
GATAGTGATTATCCTATTGAAGTGATGAAAAAAGCTGGAGTGGATATGACAAAATCGGATTATTTAGAAGATGCGATGCA
TGTTTTTGAAGAGCGGTTAAATGAGTTAGAACTACTCGTTGATGAATTAGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.637 |
98.017 |
0.536 |