Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | OTEC02_RS17430 | Genome accession | NZ_CP020015 |
| Coordinates | 3676046..3676372 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter lactucae strain OTEC-02 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3671046..3681372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTEC02_RS17410 (OTEC02_17410) | - | 3671148..3671774 (-) | 627 | WP_081175486.1 | FHA domain-containing protein | - |
| OTEC02_RS17415 (OTEC02_17415) | gspD | 3671815..3674091 (-) | 2277 | WP_081175488.1 | type II secretion system secretin GspD | - |
| OTEC02_RS17420 (OTEC02_17420) | - | 3674133..3674969 (-) | 837 | WP_061874303.1 | type II secretion system protein N | - |
| OTEC02_RS17425 (OTEC02_17425) | gspN | 3674969..3675712 (-) | 744 | WP_081175490.1 | type II secretion system protein N | - |
| OTEC02_RS17430 (OTEC02_17430) | hns | 3676046..3676372 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| OTEC02_RS17435 (OTEC02_17435) | - | 3676567..3677007 (-) | 441 | WP_213033121.1 | thioesterase family protein | - |
| OTEC02_RS17440 (OTEC02_17440) | - | 3677015..3678208 (-) | 1194 | WP_031947173.1 | membrane protein | - |
| OTEC02_RS17445 (OTEC02_17445) | - | 3678218..3679060 (-) | 843 | WP_061874306.1 | hypothetical protein | - |
| OTEC02_RS17450 (OTEC02_17450) | - | 3679069..3679836 (-) | 768 | WP_081175492.1 | uroporphyrinogen-III synthase | - |
| OTEC02_RS17455 (OTEC02_17455) | hemC | 3679840..3680757 (-) | 918 | WP_213033122.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=220108 OTEC02_RS17430 WP_000801427.1 3676046..3676372(-) (hns) [Acinetobacter lactucae strain OTEC-02]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=220108 OTEC02_RS17430 WP_000801427.1 3676046..3676372(-) (hns) [Acinetobacter lactucae strain OTEC-02]
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATTGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGTGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGCGCAAAACTAGAAGATTTCTT
AATCTAA
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATTGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGTGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGCGCAAAACTAGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |