Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | BV140_RS05680 | Genome accession | NZ_CP020013 |
| Coordinates | 1115670..1115957 (+) | Length | 95 a.a. |
| NCBI ID | WP_005655928.1 | Uniprot ID | A0A0H3PGC3 |
| Organism | Haemophilus influenzae strain 6P32H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1110670..1120957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV140_RS05655 (BV140_1148) | nrfE | 1110732..1112639 (-) | 1908 | WP_005659178.1 | heme lyase NrfEFG subunit NrfE | - |
| BV140_RS05660 (BV140_1149) | suhB | 1112748..1113551 (-) | 804 | WP_005659182.1 | inositol-1-monophosphatase | - |
| BV140_RS05665 (BV140_1150) | comN | 1113751..1114263 (+) | 513 | WP_005651545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| BV140_RS05670 (BV140_1151) | comO | 1114263..1114979 (+) | 717 | WP_005655922.1 | type II secretion system protein J | Machinery gene |
| BV140_RS05675 (BV140_1152) | comP | 1114994..1115677 (+) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| BV140_RS05680 (BV140_1153) | comQ | 1115670..1115957 (+) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| BV140_RS05685 (BV140_1154) | recC | 1116003..1119368 (+) | 3366 | WP_005686198.1 | exodeoxyribonuclease V subunit gamma | - |
| BV140_RS05690 (BV140_1155) | nrdR | 1119423..1119872 (+) | 450 | WP_005651549.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 11033.81 Da Isoelectric Point: 9.2205
>NTDB_id=220028 BV140_RS05680 WP_005655928.1 1115670..1115957(+) (comQ) [Haemophilus influenzae strain 6P32H1]
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
Nucleotide
Download Length: 288 bp
>NTDB_id=220028 BV140_RS05680 WP_005655928.1 1115670..1115957(+) (comQ) [Haemophilus influenzae strain 6P32H1]
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
95.789 |
100 |
0.958 |