Detailed information NTG0219814

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C1I23_RS24705
• Genome accession: NZ_CP025747
• Coordinates: 4682048..4683073 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ML35
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4677048..4688073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1I23_RS24685 (C1I23_24745)	metJ	4678109..4678426 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
C1I23_RS24690 (C1I23_24750)	yiiX	4678610..4679218 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
C1I23_RS24695 (C1I23_24755)	rpmE	4679279..4679491 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
C1I23_RS24700 (C1I23_24760)	priA	4679694..4681892 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
C1I23_RS24705 (C1I23_24765)	cytR	4682048..4683073 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
C1I23_RS24710 (C1I23_24770)	ftsN	4683165..4684124 (+)	960	WP_000068828.1	cell division protein FtsN	-
C1I23_RS24715 (C1I23_24775)	hslV	4684217..4684747 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
C1I23_RS24720 (C1I23_24780)	hslU	4684757..4686088 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
C1I23_RS24725 (C1I23_24785)	menA	4686155..4687081 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C1I23_RS24730 (C1I23_24790)	rraA	4687174..4687659 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
C1I23_RS24735 (C1I23_24795)	zapB	4687744..4687989 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=219814 C1I23_RS24705 WP_000644904.1 4682048..4683073(+) (cytR) [Escherichia coli strain ML35]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=219814 C1I23_RS24705 WP_000644904.1 4682048..4683073(+) (cytR) [Escherichia coli strain ML35]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628