Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | BV085_RS05380 | Genome accession | NZ_CP020007 |
| Coordinates | 1071258..1071545 (+) | Length | 95 a.a. |
| NCBI ID | WP_005655928.1 | Uniprot ID | A0A0H3PGC3 |
| Organism | Haemophilus influenzae strain 48P153H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1066258..1076545
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV085_RS05355 (BV085_1088) | nrfE | 1066320..1068227 (-) | 1908 | WP_005659178.1 | heme lyase NrfEFG subunit NrfE | - |
| BV085_RS05360 (BV085_1089) | suhB | 1068336..1069139 (-) | 804 | WP_005659182.1 | inositol-1-monophosphatase | - |
| BV085_RS05365 (BV085_1090) | comN | 1069339..1069851 (+) | 513 | WP_005651545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| BV085_RS05370 (BV085_1091) | comO | 1069851..1070567 (+) | 717 | WP_005655922.1 | type II secretion system protein J | Machinery gene |
| BV085_RS05375 (BV085_1092) | comP | 1070582..1071265 (+) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| BV085_RS05380 (BV085_1093) | comQ | 1071258..1071545 (+) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| BV085_RS05385 (BV085_1094) | recC | 1071591..1074956 (+) | 3366 | WP_005686198.1 | exodeoxyribonuclease V subunit gamma | - |
| BV085_RS05390 (BV085_1095) | nrdR | 1075011..1075460 (+) | 450 | WP_005651549.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 11033.81 Da Isoelectric Point: 9.2205
>NTDB_id=219814 BV085_RS05380 WP_005655928.1 1071258..1071545(+) (comQ) [Haemophilus influenzae strain 48P153H1]
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
Nucleotide
Download Length: 288 bp
>NTDB_id=219814 BV085_RS05380 WP_005655928.1 1071258..1071545(+) (comQ) [Haemophilus influenzae strain 48P153H1]
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
95.789 |
100 |
0.958 |