Detailed information NTG0219740

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: BUM88_RS17950
• Genome accession: NZ_CP020000
• Coordinates: 3721286..3723439 (-)
• Length: 717 a.a.
• NCBI ID: WP_080027891.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain CA16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3716286..3728439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUM88_RS17935 (BUM88_17935)	-	3718696..3719577 (-)	882	WP_080027889.1	hypothetical protein	-
BUM88_RS17940 (BUM88_17940)	aroB	3719594..3720676 (-)	1083	WP_080027890.1	3-dehydroquinate synthase	-
BUM88_RS17945 (BUM88_17945)	aroK	3720705..3721274 (-)	570	WP_003653807.1	shikimate kinase AroK	-
BUM88_RS17950 (BUM88_17950)	pilQ	3721286..3723439 (-)	2154	WP_080027891.1	type IV pilus secretin PilQ family protein	Machinery gene
BUM88_RS17955 (BUM88_17955)	pilP	3723502..3724029 (-)	528	WP_003653811.1	pilus assembly protein PilP	Machinery gene
BUM88_RS17960 (BUM88_17960)	pilO	3724040..3724789 (-)	750	WP_005038271.1	type 4a pilus biogenesis protein PilO	Machinery gene
BUM88_RS17965 (BUM88_17965)	pilN	3724786..3725427 (-)	642	WP_080027892.1	PilN domain-containing protein	Machinery gene
BUM88_RS17970 (BUM88_17970)	pilM	3725427..3726485 (-)	1059	WP_213033728.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 77698.91 Da
• Isoelectric Point: 5.4781

>NTDB_id=219740 BUM88_RS17950 WP_080027891.1 3721286..3723439(-) (pilQ) [Acinetobacter calcoaceticus strain CA16]
MNHVFRQFYMGAVAIAVMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFNKAQQTLTQSKV
AIGTNEASSVDVSSDDQRSRLTINLKEAGAFTTRIEGNTFILKINSAQAAIKPLSTNTMQPQGVSNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVRTLGSKIPAHLAKRLNVNDFATPVSTIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVTELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAQAQDIMGLITQGSNNSNGLQRTSAGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGVNSNNSLLVGGSDTTLWNLREPDDEGKYTIERPDNLNVDLGVTSAGASSIAFSLISMSDFMLDLELSALQADGYGEV
ISTPKVMTADKQRARVATGQQVPYQTTTNSASGSTATTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVADSAPNGELI
LNKNQINTNVLVNNGETVILGGVFEQATSNSQTKVPFLGDLPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRNH

Nucleotide

• Length: 2154 bp

>NTDB_id=219740 BUM88_RS17950 WP_080027891.1 3721286..3723439(-) (pilQ) [Acinetobacter calcoaceticus strain CA16]
ATGAATCACGTATTCCGTCAGTTTTATATGGGGGCTGTAGCCATTGCAGTTATGCAGGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACCCAAATTGCAGGTCAGGGTACAGAAATTAGAGTGATGTTTAATGGTTTGCCGCCGCAACCAC
AGGCATATCAACTTGAAAATCCTTCACGTTTGATTTTGGATTTTAATAAAGCTCAGCAGACTTTAACACAGTCAAAAGTG
GCAATTGGTACAAATGAAGCGAGCTCGGTCGATGTAAGTTCTGACGATCAGCGCTCACGTTTAACTATAAATTTAAAAGA
GGCGGGTGCATTTACAACGCGCATAGAAGGCAATACTTTTATTTTAAAGATTAATTCAGCTCAAGCAGCTATTAAACCTT
TATCAACAAATACAATGCAACCCCAAGGCGTTTCAAATATTGGCTTTCAGCGTGGTGGTCAAGGTGAAGGGTTAATTGTT
ATTGATTTATTGGGAAGTAATACTCCTGTTGATGTTCAACAGCAAGGCAGCAAAGTCGTAGTGAGGACATTGGGCTCTAA
AATTCCCGCTCATTTAGCTAAACGTTTAAATGTGAACGATTTTGCGACTCCTGTTTCTACCATCGAATCTTATAATGAAA
AAGGCAATGGCGTGATTACGATTCAATCCACTGGTAGCTATGAATATATGGCTTATCAAGCGGAAAATAAACTCACCATT
AGCTTAAAGCGTCCTCAGGACAAAAACGTAACTTCTTTATATAAGACGCCTAATTACTCTGGTAATAAGCTTTCTCTTGA
TTTCCAAGATATTGAAGTTCGTAGGGTTCTACAGTTACTTGCCGATTTTACGGGCATTAATATGGTGGCCGCAGATAGTG
TTCAGGGTAATATTACTTTGCGCTTGAAAGATGTTCCGTGGGATCAGGCACTTGATATTATTTTAAAGACCAAAAATCTT
GATAAACGCAGAAATGGTAACGTTATTTGGATTGCTCCTGTTACAGAGTTGATCAAGGCTGAAGAAGAAGAAGCTAAGGC
TGTTGCTCAAAGTGTTAAGCTAGCCCCGTTACAGACTGAGTATATTCAACTTAAATATGCGCAAGCTCAGGATATTATGG
GCTTAATTACTCAAGGTTCAAATAACAGTAATGGTTTGCAGCGTACTTCTGCTGGCGGAACATCAACTTCTACTAATTTA
AATACGGGTGTTGATAGTTTAGGCAATAACGTAGGGAGTTTGTTGAGTCCACGTGGAACAATTACTCAAGATGATCGAAC
CAATACCTTAATTATTAATGATACAGCACAGTCGATTGATCAAATTCGTAAAATGATTGATTTGTTGGATGTGCAAGTCA
AACAGGTCATGGTTGAGGCGCGAATTGTAAGAGCATCTACTTCATTTACCAAGGAGCTTGGCGTTAAGTGGGGAATATTA
TCGCAAGGTGTGAACAGTAATAACAGTTTGTTGGTGGGGGGGAGTGATACGACGCTTTGGAATTTAAGAGAACCAGATGA
TGAAGGTAAATACACGATTGAACGGCCAGATAATTTAAACGTTGATTTGGGTGTTACATCAGCTGGAGCCAGTAGCATAG
CTTTTAGCTTAATTAGTATGTCTGATTTTATGTTGGATTTAGAGTTATCAGCATTGCAGGCAGATGGCTATGGTGAAGTG
ATTTCAACACCAAAAGTCATGACTGCAGATAAACAACGAGCTAGAGTGGCAACAGGTCAGCAAGTTCCATATCAAACTAC
AACTAATTCTGCTTCTGGTTCAACTGCCACAACTTCTTTTAAAGATGCGCTGTTAAGTTTGGATGTTACGCCAAGTATTA
CACCTGATGGTAAAATTCAAATGAAATTGGATATTTCAAAAGACTCGGTTGCCGATAGTGCTCCTAATGGCGAGTTAATT
TTGAATAAAAATCAGATTAACACCAATGTATTGGTAAATAATGGGGAAACCGTTATTTTGGGTGGAGTATTTGAACAGGC
AACTTCTAATTCACAAACCAAAGTTCCTTTCTTGGGAGACCTCCCTGTAGTTGGCCGTTTATTTAGAAAAGATGTGAAAT
CTGATGATAAACAAGAGTTACTGATTTTCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

• AMIN domain (AMIN) (39-118)

• Bacterial type II and III secretion system protein (Secretin) (551-709)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	89.751	100	0.904
pilQ	Acinetobacter baumannii strain A118	89.612	100	0.902
comQ	Acinetobacter baylyi ADP1	74.93	100	0.75
pilQ	Pseudomonas aeruginosa PAK	39.776	99.582	0.396