Detailed information NTG0219728

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BUM88_RS08630
• Genome accession: NZ_CP020000
• Coordinates: 1757146..1757961 (+)
• Length: 271 a.a.
• NCBI ID: WP_080026948.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain CA16
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1752146..1762961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUM88_RS08595 (BUM88_08595)	kdsB	1752669..1753430 (+)	762	WP_080026944.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BUM88_RS08600 (BUM88_08600)	-	1753444..1754424 (+)	981	WP_080026945.1	DNA polymerase III subunit delta'	-
BUM88_RS08605 (BUM88_08605)	-	1754435..1754776 (+)	342	WP_003651467.1	PilZ domain-containing protein	-
BUM88_RS08610 (BUM88_08610)	-	1754794..1755567 (+)	774	WP_080026946.1	TatD family hydrolase	-
BUM88_RS08615 (BUM88_08615)	-	1755604..1756212 (+)	609	WP_004642629.1	TetR/AcrR family transcriptional regulator	-
BUM88_RS08620 (BUM88_08620)	-	1756222..1756776 (+)	555	WP_080026947.1	type II secretion system protein	-
BUM88_RS08625 (BUM88_08625)	xcpV	1756766..1757146 (+)	381	WP_004642631.1	type II secretion system minor pseudopilin GspI	Machinery gene
BUM88_RS08630 (BUM88_08630)	xcpW	1757146..1757961 (+)	816	WP_080026948.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BUM88_RS08635 (BUM88_08635)	gspK	1757961..1758920 (+)	960	WP_080026949.1	type II secretion system minor pseudopilin GspK	-
BUM88_RS08640 (BUM88_08640)	-	1759150..1759746 (+)	597	WP_003651480.1	6-pyruvoyl trahydropterin synthase family protein	-
BUM88_RS08645 (BUM88_08645)	ung	1759796..1760509 (+)	714	WP_005041081.1	uracil-DNA glycosylase	-
BUM88_RS08650 (BUM88_08650)	-	1760506..1761630 (+)	1125	WP_080026950.1	enoyl-CoA hydratase/isomerase family protein	-
BUM88_RS08655 (BUM88_08655)	tadA	1761636..1762139 (+)	504	WP_005041077.1	tRNA adenosine(34) deaminase TadA	-
BUM88_RS08660 (BUM88_08660)	-	1762210..1762650 (+)	441	WP_003651485.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30909.36 Da
• Isoelectric Point: 10.1964

>NTDB_id=219728 BUM88_RS08630 WP_080026948.1 1757146..1757961(+) (xcpW) [Acinetobacter calcoaceticus strain CA16]
MIKNKYFRSRSTASRLAARSEQMMRGYSEQSSSSCAQTKRCFKDSHTRNTVSRLTARSSSARLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLHPALELDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKG
IKIQLTVAGVSYEWIYSLNQGNLSLSKQGGA

Nucleotide

• Length: 816 bp

>NTDB_id=219728 BUM88_RS08630 WP_080026948.1 1757146..1757961(+) (xcpW) [Acinetobacter calcoaceticus strain CA16]
ATGATAAAAAATAAATATTTTCGCTCTCGAAGCACAGCTTCACGTCTTGCAGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCGTTGCTTTAAAGACTCTCACACTCGAAACACAGTTTCTCGTC
TTACGGCACGATCGAGCAGTGCTCGATTAACTCGCGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATT
TTTGCTGTTTTATCTTTGTTAGGTTGGAAGATTTTTGATTATTTATTAAAAGTCCGTGATCGTAATGCTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCGTATCAACAAGTTTTGCGAGATACATTACAAATTATACCCTTATCGGCAAATCAAG
GGGGGCAGCTTCATCCAGCATTAGAACTTGATAATCAAGTTCTTCGCTTTAGTAAGGCTGGTGTTACTGATCCTTTAAAA
CAAGGGTTATCACCTTTTGAGCGTATTGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGCAA
TTTAAATACTTCAAACAGAGAGCAACCTTTATCTAGCACTTTGTTGAGTCAAGTTGAACAGTTTCAAATTATGGTGCTCA
CGCCACAAGAAGTGACGAAGTGGCCAGAAATTAATATTGATCCCACAAAGCCAGAAGAGTTTAGAAAACTGCCAAAAGGA
ATAAAAATACAACTCACAGTTGCTGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGGAATTTATCGCTCTCCAA
ACAAGGAGGAGCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	89.381	83.395	0.745