Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SPYM18_RS09645 Genome accession   NC_003485
Coordinates   1894240..1895016 (+) Length   258 a.a.
NCBI ID   WP_023079621.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS8232     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1889240..1900016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM18_RS09625 - 1891068..1891842 (-) 775 Protein_1876 IS30 family transposase -
  SPYM18_RS09635 (spyM18_2255) rlmH 1892237..1892716 (-) 480 WP_011018348.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SPYM18_RS09640 (spyM18_2256) htrA 1892928..1894151 (+) 1224 WP_002981947.1 S1C family serine protease Regulator
  SPYM18_RS09645 (spyM18_2257) spo0J 1894240..1895016 (+) 777 WP_023079621.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29058.85 Da        Isoelectric Point: 10.3100

>NTDB_id=21961 SPYM18_RS09645 WP_023079621.1 1894240..1895016(+) (spo0J) [Streptococcus pyogenes MGAS8232]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKSIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=21961 SPYM18_RS09645 WP_023079621.1 1894240..1895016(+) (spo0J) [Streptococcus pyogenes MGAS8232]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAATCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581

Multiple sequence alignment