Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BC8716_RS14925 Genome accession   NZ_CP019985
Coordinates   3114049..3114231 (+) Length   60 a.a.
NCBI ID   WP_094426919.1    Uniprot ID   A0A268RX02
Organism   Shouchella clausii strain DSM 8716     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3109049..3119231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC8716_RS14905 (BC8716_14895) argF 3109378..3110322 (+) 945 WP_094426910.1 ornithine carbamoyltransferase -
  BC8716_RS14910 (BC8716_14900) - 3110654..3111346 (+) 693 WP_094426912.1 hypothetical protein -
  BC8716_RS14915 (BC8716_14905) - 3111402..3112238 (+) 837 WP_157730453.1 NAD(P)-dependent oxidoreductase -
  BC8716_RS14920 (BC8716_14910) - 3112296..3113903 (-) 1608 WP_094426917.1 peptide chain release factor 3 -
  BC8716_RS14925 (BC8716_14915) comZ 3114049..3114231 (+) 183 WP_094426919.1 ComZ family protein Regulator
  BC8716_RS14930 (BC8716_14920) - 3114435..3114710 (-) 276 WP_094426921.1 hypothetical protein -
  BC8716_RS14935 (BC8716_14925) - 3114905..3115840 (+) 936 WP_094426923.1 beta-ketoacyl-ACP synthase III -
  BC8716_RS14940 (BC8716_14930) fabF 3115889..3117130 (+) 1242 WP_094426925.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7002.17 Da        Isoelectric Point: 4.5738

>NTDB_id=219576 BC8716_RS14925 WP_094426919.1 3114049..3114231(+) (comZ) [Shouchella clausii strain DSM 8716]
MEQHERNLKFMEIAMKHVPEARKLLEGKGIEVTMDELQPLLALLLHVMNEAYELGLNEQE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=219576 BC8716_RS14925 WP_094426919.1 3114049..3114231(+) (comZ) [Shouchella clausii strain DSM 8716]
ATGGAACAGCACGAAAGAAATTTGAAGTTCATGGAAATCGCCATGAAGCATGTACCTGAAGCGCGGAAATTGCTAGAAGG
CAAAGGCATAGAAGTAACAATGGATGAACTGCAGCCGCTGCTAGCATTGTTGCTTCATGTGATGAACGAAGCGTATGAAC
TTGGGTTAAACGAGCAGGAATGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A268RX02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

51.786

93.333

0.483

Multiple sequence alignment