Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpE   Type   Regulator
Locus tag   B2G84_RS02905 Genome accession   NZ_CP019979
Coordinates   505738..507999 (-) Length   753 a.a.
NCBI ID   WP_000882549.1    Uniprot ID   A0A0E1EFR4
Organism   Streptococcus agalactiae strain Sag158     
Function   repress competence development (at the early growth phase) (predicted from homology)   
Competence regulation

Genomic Context


Location: 500738..512999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G84_RS02885 (B2G84_02885) - 500767..501537 (+) 771 WP_001131467.1 DivIVA domain-containing protein -
  B2G84_RS02890 (B2G84_02890) ileS 501822..504614 (+) 2793 WP_079218620.1 isoleucine--tRNA ligase -
  B2G84_RS02895 (B2G84_02895) - 504731..505033 (-) 303 WP_001237035.1 DUF1827 family protein -
  B2G84_RS02900 (B2G84_02900) - 505097..505552 (-) 456 WP_000184292.1 NUDIX hydrolase -
  B2G84_RS02905 (B2G84_02905) clpE 505738..507999 (-) 2262 WP_000882549.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  B2G84_RS02910 (B2G84_02910) - 508297..508527 (+) 231 WP_000443582.1 DUF1797 family protein -
  B2G84_RS02915 (B2G84_02915) - 508669..509361 (+) 693 WP_001011647.1 amino acid ABC transporter permease -
  B2G84_RS02920 (B2G84_02920) - 509354..510088 (+) 735 WP_000230134.1 amino acid ABC transporter ATP-binding protein -
  B2G84_RS02925 (B2G84_02925) - 510375..512069 (+) 1695 WP_079218622.1 phospho-sugar mutase -

Sequence


Protein


Download         Length: 753 a.a.        Molecular weight: 83766.92 Da        Isoelectric Point: 5.2771

>NTDB_id=219454 B2G84_RS02905 WP_000882549.1 505738..507999(-) (clpE) [Streptococcus agalactiae strain Sag158]
MLCQNCKLNESTIHLYTNVNGKQKQVDLCQNCYQIIKTDPNNPLFSGLNHVSHAPGGINPFFDDFFGDLNNFRAFNGQDL
PNTPPTQSGGNRGGGNGNGRNNNRNQTATPSQAKGILEEFGINVTEIARHGDIDPVIGRDSEIIRVIEILNRRTKNNPVL
IGEPGVGKTAVVEGLAQKIVDGNVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVG
AGTAGEGSMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQKKYEDYHHVKY
NNDAIEAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQRLIEAENLKAQATREEDYERAAYFRDQIAK
YKEMQQQKVDDQDTPIITEKTIEHIIEEKTNIPVGDLKEKEQSQLINLADDLKQHVIGQDDAVVKIAKAIRRNRVGLGSP
NRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLI
LLDEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGSGKTEASVGFGASREGRTNSVLGQLGNFFSPEF
MNRFDGIIEFKALDKENLLNIVDIMLSDVNARLAINGIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQEHIEDAITDYY
LENPSEKELRAIMTSNGNIIIKSSKKTEESTKG

Nucleotide


Download         Length: 2262 bp        

>NTDB_id=219454 B2G84_RS02905 WP_000882549.1 505738..507999(-) (clpE) [Streptococcus agalactiae strain Sag158]
ATGCTCTGTCAAAACTGCAAACTAAACGAATCAACTATTCATTTGTATACAAATGTTAATGGAAAACAAAAGCAAGTTGA
TCTTTGTCAAAATTGCTACCAAATTATTAAAACTGACCCTAATAATCCACTTTTTTCAGGTTTAAATCATGTTTCACATG
CGCCTGGTGGCATCAATCCTTTCTTTGATGATTTCTTTGGAGATTTAAATAATTTCAGAGCCTTTAATGGCCAAGATTTA
CCAAACACTCCTCCTACACAATCAGGAGGAAACCGAGGTGGAGGAAACGGTAATGGACGAAATAATAATCGCAACCAAAC
TGCAACTCCTTCTCAAGCCAAAGGGATTCTAGAAGAATTTGGTATCAATGTCACTGAAATAGCCCGCCATGGTGATATTG
ACCCTGTTATTGGACGTGACTCAGAAATTATTCGTGTTATCGAAATCCTTAATCGTCGTACAAAAAATAATCCTGTACTT
ATTGGCGAACCCGGCGTTGGGAAAACTGCCGTTGTTGAAGGACTTGCTCAGAAAATTGTTGATGGTAATGTGCCTCATAA
ACTTCAAGGCAAACAAGTTATTCGTTTGGATGTTGTGAGTCTAGTACAAGGAACGGGCATTCGTGGTCAATTTGAAGAAC
GCATGCAAAAGTTGATGGAAGAAATTCGTCAACGTCAAGATGTTATTCTATTCATAGATGAAATTCACGAAATAGTTGGA
GCTGGTACAGCTGGCGAAGGTAGTATGGATGCAGGTAATATTTTAAAACCTGCCCTTGCACGTGGAGAATTACAACTAGT
AGGTGCTACTACTCTCAATGAATATCGTATTATCGAAAAGGACGCTGCCTTAGAACGCCGTATGCAACCTGTAAAAGTCG
ATGAGCCTTCTGTTGAAGAAACCATTACTATTTTGAAAGGTATCCAAAAAAAATACGAAGATTATCATCATGTAAAATAT
AATAATGATGCCATAGAAGCAGCTGCAGTACTATCTAATCGTTATATCCAGGACCGCTTTCTACCTGATAAAGCAATAGA
CTTATTAGATGAAGCTGGTTCTAAAATGAACCTAACACTAAATTTTGTTGATCCAAAAGAAATTGATCAACGTCTCATTG
AAGCAGAAAATTTAAAAGCGCAAGCGACTCGTGAAGAAGATTACGAACGTGCAGCTTACTTCCGTGACCAGATTGCAAAA
TATAAAGAAATGCAACAACAAAAGGTCGACGATCAAGATACACCTATTATTACCGAAAAAACAATTGAGCACATCATTGA
AGAAAAAACGAATATCCCTGTTGGTGATTTAAAAGAAAAAGAACAATCTCAATTAATTAATCTCGCAGATGACTTGAAAC
AACATGTGATCGGCCAGGATGACGCTGTCGTTAAGATTGCAAAAGCTATTCGTCGTAATCGAGTTGGTCTTGGTAGCCCA
AACCGTCCTATTGGTTCCTTTTTATTTGTAGGACCAACCGGCGTTGGTAAAACTGAACTTTCTAAACAACTAGCAATTGA
GCTCTTTGGTTCAGCTGATAGTATGATTCGTTTTGATATGTCAGAGTACATGGAAAAGCATGCTGTTGCTAAATTAGTCG
GAGCGCCTCCAGGATACGTGGGATACGAGGAAGCTGGACAATTAACTGAAAAGGTTCGTCGAAATCCTTACTCGCTCATC
CTTCTAGATGAAATTGAAAAAGCTCATCCTGATGTCATGCATATGTTCTTGCAGGTCCTTGATGACGGTCGATTAACAGA
TGGACAAGGAAGAACTGTTAGTTTTAAAGATACCATTATCATCATGACCTCAAATGCTGGTTCTGGTAAAACTGAAGCAA
GCGTTGGCTTTGGTGCCTCACGAGAAGGTAGAACGAATTCCGTACTAGGTCAACTAGGTAACTTCTTCAGCCCTGAATTT
ATGAACCGCTTTGACGGTATTATTGAATTCAAGGCTTTAGATAAAGAGAATCTCCTCAATATCGTTGATATTATGTTATC
TGACGTTAATGCACGTCTCGCCATCAATGGTATTCATCTAGATGTCACTGATAAAGTGAAAGAAAAATTGGTTGATTTAG
GTTACGATCCCAAAATGGGAGCACGTCCATTACGTCGTACCATTCAAGAACATATTGAAGATGCTATCACAGATTACTAT
CTTGAGAATCCAAGCGAAAAAGAACTTCGTGCTATTATGACTAGCAATGGAAATATCATAATAAAATCTTCTAAAAAAAC
TGAAGAAAGTACAAAAGGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EFR4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpE Streptococcus mutans UA159

85.676

100

0.858

  clpE Streptococcus pneumoniae Rx1

85.714

99.469

0.853

  clpE Streptococcus pneumoniae D39

85.714

99.469

0.853

  clpE Streptococcus pneumoniae R6

85.714

99.469

0.853

  clpE Streptococcus pneumoniae TIGR4

85.581

99.469

0.851

  clpC Lactococcus lactis subsp. cremoris KW2

74.867

99.867

0.748

  clpC Bacillus subtilis subsp. subtilis str. 168

51.327

90.04

0.462

  clpC Lactococcus lactis subsp. lactis strain DGCC12653

47.528

83.267

0.396

  clpC Streptococcus pneumoniae Rx1

47.003

84.197

0.396

  clpC Streptococcus pneumoniae D39

47.003

84.197

0.396

  clpC Streptococcus pneumoniae TIGR4

46.845

84.197

0.394

  clpC Streptococcus thermophilus LMD-9

46.276

83.798

0.388

  clpC Streptococcus mutans UA159

46.87

82.736

0.388

  clpC Streptococcus thermophilus LMG 18311

45.959

83.798

0.385


Multiple sequence alignment