Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SPYM18_RS02580 Genome accession   NC_003485
Coordinates   476989..477798 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS8232     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 471989..482798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM18_RS02560 (spyM18_0592) - 472431..473678 (+) 1248 WP_011017492.1 AMP-binding protein -
  SPYM18_RS02565 (spyM18_0593) - 473734..474768 (+) 1035 WP_161222554.1 DUF3114 domain-containing protein -
  SPYM18_RS02570 (spyM18_0594) vicR 474930..475640 (+) 711 WP_002985645.1 response regulator YycF Regulator
  SPYM18_RS02575 (spyM18_0595) vicK 475633..476985 (+) 1353 WP_011017494.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SPYM18_RS02580 (spyM18_0596) vicX 476989..477798 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  SPYM18_RS02585 (spyM18_0597) rnc 478241..478933 (+) 693 WP_002990670.1 ribonuclease III -
  SPYM18_RS02590 (spyM18_0598) smc 478934..482473 (+) 3540 WP_011017495.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=21933 SPYM18_RS02580 WP_002985641.1 476989..477798(+) (vicX) [Streptococcus pyogenes MGAS8232]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=21933 SPYM18_RS02580 WP_002985641.1 476989..477798(+) (vicX) [Streptococcus pyogenes MGAS8232]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment